ggKbase home page

13_1_40cm_3_scaffold_35088

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_35088_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(2..397)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBC3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58601.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_35088_2
unknown

Not on your lists

comp(568..747)
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_3_scaffold_35088_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

2083..3108
DNA (1026bp) protein (342aa)
DNA repair and recombination protein RadA n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJZ6_NITGG rbh
radA1; DNA repair and recombination protein
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" s
13_1_40cm_3_scaffold_35088_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(3110..4180)
DNA (1071bp) protein (357aa)
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18) rbh
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaer
Anthranilate phosphoribosyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II35_NITGG rbh
13_1_40cm_3_scaffold_35088_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(4359..4688)
DNA (330bp) protein (110aa)
trpG; anthranilate synthase component II (EC:4.1.3.27)
Anthranilate synthase component II {ECO:0000313|EMBL:AFU58604.1}; EC=4.1.3.27 {ECO:0000313|EMBL:AFU58604.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitros
Anthranilate synthase component II n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN19_NITGG
13_1_40cm_3_scaffold_35088_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

5027..5884
DNA (858bp) protein (286aa)
gap; glyceraldehyde-3-phosphate dehydrogenase, phosphorylating (EC:1.2.1.59)
Putative glyceraldehyde-3-phosphate dehydrogenase, phosphorylating {ECO:0000313|EMBL:AFU58605.1}; EC=1.2.1.59 {ECO:0000313|EMBL:AFU58605.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososph
Putative glyceraldehyde-3-phosphate dehydrogenase, phosphorylating n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFL6_NITGG rbh
13_1_40cm_3_scaffold_35088_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(6171..6647)
DNA (477bp) protein (159aa)
Putative transcriptional regulator, XRE family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN22_NITGG
XRE family transcriptional regulator
Putative transcriptional regulator, XRE family {ECO:0000313|EMBL:AFU58619.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;"
13_1_40cm_3_scaffold_35088_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

6754..8022
DNA (1269bp) protein (423aa)
Peptide chain release factor subunit 1 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK10_NITGG rbh
prf1; peptide chain release factor subunit 1
Peptide chain release factor subunit 1 {ECO:0000313|EMBL:AFU58622.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="
13_1_40cm_3_scaffold_35088_9
unknown

Not on your lists

8233..8547
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_3_scaffold_35088_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

8601..10220
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II53_NITGG rbh
hypothetical protein with ATP-binding domain
Uncharacterized protein {ECO:0000313|EMBL:AFU58623.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_35088_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

10254..10910
DNA (657bp) protein (219aa)
psmB2; proteasome subunit beta (EC:3.4.25.1)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
Proteasome subunit beta n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN23_NITGG rbh
13_1_40cm_3_scaffold_35088_12
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

11411..11596
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBH0_NITGG
TIGR00266 family protein
TIGR00266 family protein {ECO:0000313|EMBL:AIF83955.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nit
Displaying 12 items

View Taxonomy