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PW_scaffold_19

Alias: PW_Methanogen_55_643_4

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Displaying items 1-30 of 70 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PW_scaffold_19_1
unknown

Not on your lists

comp(1..207)
DNA (207bp) protein (69aa)
PW_scaffold_19_2
unknown

Not on your lists

comp(252..668)
DNA (417bp) protein (139aa)
PW_scaffold_19_3
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

871..1374
DNA (504bp) protein (168aa)
archaeal flagellin N-terminal-like domain protein
Archaeal flagellin N-terminal-like domain protein {ECO:0000313|EMBL:AGK61443.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source=
Archaeal flagellin N-terminal-like domain protein
PW_scaffold_19_4
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1652..2650)
DNA (999bp) protein (333aa)
PP-loop domain-containing protein
PP-loop domain protein {ECO:0000313|EMBL:ABK14366.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta thermophi
PP-loop domain protein
PW_scaffold_19_5
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2749..3639
DNA (891bp) protein (297aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; Flags: Precursor;; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcin
Zn-dependent protease with chaperone function
Protease HtpX homolog
PW_scaffold_19_6
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

3640..4200
DNA (561bp) protein (187aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU54279.1}; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium fer
Putative uncharacterized protein
PW_scaffold_19_7
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4237..5259)
DNA (1023bp) protein (341aa)
NMD protein affecting ribosome stability and mRNA decay
NMD protein affecting ribosome stability and mRNA decay {ECO:0000313|EMBL:AGB49226.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanometh
NMD protein affecting ribosome stability and mRNA decay
PW_scaffold_19_8
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5256..6371)
DNA (1116bp) protein (372aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000255|HAMAP-Rule:MF_00300}; Short=CS {ECO:0000255|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000255|HAMAP-Rule:MF_00300};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:
Chorismate synthase
PW_scaffold_19_9
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6694..8181
DNA (1488bp) protein (496aa)
Putative (R)-citramalate synthase CimA {ECO:0000256|HAMAP-Rule:MF_01028}; EC=2.3.1.182 {ECO:0000256|HAMAP-Rule:MF_01028};; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcina
isopropylmalate/citramalate/homocitrate synthase
Putative (R)-citramalate synthase CimA
PW_scaffold_19_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8197..9399)
DNA (1203bp) protein (401aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanope
Threonine synthase (EC:4.2.3.1)
Threonine synthase
PW_scaffold_19_11
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9448..10197)
DNA (750bp) protein (250aa)
Uncharacterized protein {ECO:0000313|EMBL:ETA67622.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tinda
hypothetical protein
Uncharacterized protein
PW_scaffold_19_12
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10204..10497)
DNA (294bp) protein (98aa)
PRC-barrel domain-containing protein
PRC-barrel domain protein {ECO:0000313|EMBL:AEH61588.1}; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source="Methanosalsum zh
PRC-barrel domain protein
PW_scaffold_19_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10656..11192
DNA (537bp) protein (179aa)
Multisubunit Na+/H+ antiporter, MnhE subunit {ECO:0000313|EMBL:KCZ71675.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatu
mbhB; membrane bound hydrogenase subunit
Membrane bound hydrogenase subunit
PW_scaffold_19_14
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11189..11452
DNA (264bp) protein (88aa)
multisubunit sodium/proton antiporter, mrpf subunit
Multisubunit sodium/proton antiporter, MrpF subunit
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
PW_scaffold_19_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11449..11790
DNA (342bp) protein (114aa)
Multisubunit sodium/proton antiporter, MrpG subunit {ECO:0000313|EMBL:KCZ71677.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Ca
monovalent cation/H+ antiporter subunit G
Monovalent cation/proton antiporter, MnhG/PhaG subunit
PW_scaffold_19_16
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11787..12041
DNA (255bp) protein (85aa)
cation:proton antiporter
Monovalent cation/H+ antiporter subunit B domain protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
PW_scaffold_19_17
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12038..12313
DNA (276bp) protein (92aa)
multisubunit sodium/proton antiporter subunit MrpB
Putative multicomponent Na+-H+ antiporter subunit A
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
PW_scaffold_19_18
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12310..12753
DNA (444bp) protein (148aa)
Na+/H+ antiporter MnhB subunit-like protein (fragment)
Na+/H+ antiporter MnhB subunit-like protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
PW_scaffold_19_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12755..13108
DNA (354bp) protein (118aa)
Multisubunit Na+/H+ antiporter, MnhC subunit {ECO:0000313|EMBL:KCZ71681.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatu
NADH-ubiquinone oxidoreductase chain 4L
Multisubunit sodium/proton antiporter, MrpC subunit (TC 2.A.63.1)
PW_scaffold_19_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13105..14574
DNA (1470bp) protein (490aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit {ECO:0000313|EMBL:KCZ71682.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatu
NADH dehydrogenase/oxidoreductase
PW_scaffold_19_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14585..16054
DNA (1470bp) protein (490aa)
NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, MnhA subunit {ECO:0000313|EMBL:KCZ71683.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosa
multisubunit sodium/proton antiporter, MrpD subunit
Putative NADH-quinone oxidoreductase, subunit L
PW_scaffold_19_22
unknown

Not on your lists

16147..16245
DNA (99bp) protein (33aa)
PW_scaffold_19_23
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16242..18011
DNA (1770bp) protein (590aa)
NADH/ubiquinone/plastoquinone; K05568 multicomponent Na+:H+ antiporter subunit D Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
nuoM2; NADH-ubiquinone oxidoreductase chain M2
Putative NADH-quinone oxidoreductase subunit M
PW_scaffold_19_24
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18061..19680
DNA (1620bp) protein (540aa)
IMP cyclohydrolase {ECO:0000313|EMBL:AKB16103.1}; EC=2.1.2.3 {ECO:0000313|EMBL:AKB16103.1};; EC=3.5.4.10 {ECO:0000313|EMBL:AKB16103.1};; TaxID=1434121 species="Archaea; Euryarchaeota; Methanomicrobia;
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3)
Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
PW_scaffold_19_25
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19652..20413)
DNA (762bp) protein (254aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV23720.1}; TaxID=1094980 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus psych
Uncharacterized protein
PW_scaffold_19_26
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20410..21018)
DNA (609bp) protein (203aa)
lysine exporter (LYSE/YGGA)
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:ADE36178.1}; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" source="Me
Lysine exporter protein (LYSE/YGGA)
PW_scaffold_19_27
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21024..22028)
DNA (1005bp) protein (335aa)
Transcription initiation factor IIB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales
Transcription initiation factor IIB
PW_scaffold_19_28
unknown

Not on your lists

comp(22041..22277)
DNA (237bp) protein (79aa)
PW_scaffold_19_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22451..23287)
DNA (837bp) protein (279aa)
tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase {ECO:0000256|HAMAP-Rule:MF_01922}; EC=2.5.1.114 {ECO:0000256|HAMAP-Rule:MF_01922};; tRNA wyosine derivatives biosynthesis protein T
protein of unknown function Met10
Methyltransferase
PW_scaffold_19_30
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23284..24081)
DNA (798bp) protein (266aa)
fructose bisphosphate aldolase
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase {ECO:0000256|HAMAP-Rule:MF_00960}; Short=ADH synthase {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADHS {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADT
Fructose bisphosphate aldolase
Displaying items 1-30 of 70 in total

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