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S4JAR1_30

Alias: S4JAR1_160

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S4JAR1_30_1
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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comp(15..896)
DNA (882bp) protein (294aa)
Peptidase A24A prepilin type IV n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGT5_9EURY (db=UNIREF evalue=1.0e-47 bit_score=193.0 identity=42.55 coverage=91.156462585034)
seg (db=Seg db_id=seg from=176 to=191)
transmembrane_regions (db=TMHMM db_id=tmhmm from=265 to=287)
transmembrane_regions (db=TMHMM db_id=tmhmm from=175 to=194)
S4JAR1_30_2
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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1034..2458
DNA (1425bp) protein (475aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DG62_9EURY (db=UNIREF evalue=1.0e-30 bit_score=138.0 identity=28.83 coverage=87.3684210526316)
glycoside hydrolase 15-related (db=KEGG evalue=7.0e-18 bit_score=95.5 identity=27.18 coverage=67.1578947368421)
seg (db=Seg db_id=seg from=313 to=322)
seg (db=Seg db_id=seg from=72 to=86)
S4JAR1_30_3
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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2547..5135
DNA (2589bp) protein (863aa)
tRNA synthetase valyl/leucyl anticodon-binding n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGT9_9EURY (db=UNIREF evalue=0.0 bit_score=962.0 identity=54.45 coverage=94.4380069524913)
leucyl-tRNA synthetase
leucyl-tRNA synthetase
seg (db=Seg db_id=seg from=826 to=843)
S4JAR1_30_4

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5095..5364
DNA (270bp) protein (90aa)
seg (db=Seg db_id=seg from=66 to=79)
Uncharacterized protein {ECO:0000313|EMBL:EQD38883.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
S4JAR1_30_5
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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5364..6032
DNA (669bp) protein (223aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGU0_9EURY (db=UNIREF evalue=2.0e-37 bit_score=159.0 identity=42.73 coverage=92.8251121076233)
HAD family hydrolase
HAD-like (db=superfamily db_id=SSF56784 from=9 to=219 evalue=7.2e-36)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=6 to=218 evalue=1.3e-25)
S4JAR1_30_6
unknown

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6099..6299
DNA (201bp) protein (67aa)
seg (db=Seg db_id=seg from=6 to=14)
S4JAR1_30_7
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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6372..6788
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGU1_9EURY (db=UNIREF evalue=2.0e-52 bit_score=207.0 identity=70.29 coverage=98.5611510791367)
Putative uncharacterized protein {ECO:0000313|EMBL:EET90262.1}; TaxID=425595 species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
S4JAR1_30_8
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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6878..9385
DNA (2508bp) protein (836aa)
DNA polymerase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGU4_9EURY (db=UNIREF evalue=0.0 bit_score=1114.0 identity=67.64 coverage=97.1291866028708)
DNA polymerase I
DNA polymerase I
DNA_POLYMERASE_B (db=PatternScan db_id=PS00116 from=601 to=609 evalue=0.0 interpro_id=IPR017964 interpro_description=DNA-directed DNA polymerase, family B, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139))
S4JAR1_30_9

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9390..10337
DNA (948bp) protein (316aa)
Methionine aminopeptidase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGU5_9EURY (db=UNIREF evalue=5.0e-86 bit_score=321.0 identity=53.04 coverage=97.7848101265823)
methionine aminopeptidase (EC:3.4.11.18)
met_pdase_II: methionine aminopeptidase, (db=HMMTigr db_id=TIGR00501 from=15 to=315 evalue=6.1e-68 interpro_id=IPR002468 interpro_description=Peptidase M24A, methionine aminopeptidase, subfamily 2 GO=Molecular Function: aminopeptidase activity (GO:0004177), Biological Process: proteolysis (GO:0006508), Molecular Function: metalloexopeptidase activity (GO:0008235))
no description (db=Gene3D db_id=G3DSA:3.90.230.10 from=9 to=314 evalue=4.0e-51 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
S4JAR1_30_10
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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comp(10343..11257)
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DG61_9EURY (db=UNIREF evalue=3.0e-53 bit_score=212.0 identity=41.96 coverage=90.8196721311475)
hypothetical protein
DUF1749 (db=HMMPfam db_id=PF08538 from=27 to=296 evalue=2.2e-17 interpro_id=IPR013744 interpro_description=Protein of unknown function DUF1749)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=24 to=302 evalue=6.4e-16)
S4JAR1_30_11
unknown

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comp(11282..13177)
DNA (1896bp) protein (632aa)
seg (db=Seg db_id=seg from=134 to=144)
seg (db=Seg db_id=seg from=67 to=83)
transmembrane_regions (db=TMHMM db_id=tmhmm from=481 to=503)
transmembrane_regions (db=TMHMM db_id=tmhmm from=438 to=460)
S4JAR1_30_12
unknown

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comp(13174..15087)
DNA (1914bp) protein (638aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=383 to=402)
transmembrane_regions (db=TMHMM db_id=tmhmm from=404 to=426)
transmembrane_regions (db=TMHMM db_id=tmhmm from=446 to=468)
transmembrane_regions (db=TMHMM db_id=tmhmm from=489 to=511)
S4JAR1_30_13

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comp(15201..15446)
DNA (246bp) protein (82aa)
Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGU7_9EURY (db=UNIREF evalue=5.0e-16 bit_score=86.7 identity=50.0 coverage=97.5609756097561)
coiled-coil (db=Coil db_id=coil from=11 to=32 evalue=NA)
RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN (db=HMMPanther db_id=PTHR11573 from=46 to=81 evalue=3.3e-05 interpro_id=IPR000788 interpro_description=Ribonucleotide reductase large subunit, C-terminal GO=Molecular Function: ribonucleoside-diphosphate reductase activity (GO:0004748), Cellular Component: ribonucleoside-diphosphate reductase complex (GO:0005971), Biological Process: DNA replication (GO:0006260))
RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE ALPHA CHAIN (db=HMMPanther db_id=PTHR11573:SF3 from=46 to=81 evalue=3.3e-05)
Displaying 13 items

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