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rifcsplowo2_01_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 679 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_0_1
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

3..275
-----------------
DNA (273bp)
protein (91aa)
heavy metal translocating P-type ATPase (EC:3.6.3.4) Tax=CG_Nitrosp_02
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Heavy metal translocating P-type ATPase id=2234638 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
rifcsplowo2_01_scaffold_0_2
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

399..554
-----------------
DNA (156bp)
protein (52aa)
AIR synthase-related protein domain protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M7K0_HALMO
AIR synthase-related protein domain protein {ECO:0000313|EMBL:EMA40350.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
AIR synthase-like protein domain-containing protein
rifcsplowo2_01_scaffold_0_3
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

554..1078
-----------------
DNA (525bp)
protein (175aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1C3_THERP
hydrogenase expression/formation protein HypE
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:ACM06025.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrob
rifcsplowo2_01_scaffold_0_4
unknown

Not on your lists

comp(1081..1860)
-----------------
DNA (780bp)
protein (260aa)
Siroheme synthase, N-terminal domain protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUF6_SOLCM id=5103393 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Siroheme synthase, N-terminal domain protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUF6_SOLCM Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_0_5
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(1877..2617)
-----------------
DNA (741bp)
protein (247aa)
phosphoadenosine phosphosulfate reductase (EC:1.8.4.8); K00390 phosphoadenosine phosphosulfate reductase [EC:1.8.4.8] Tax=RBG_16_Chloroflexi_56_11_curated
Phosphoadenosine phosphosulfate reductase id=4282336 bin=GWF2_OP3_43_52 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
phosphoadenosine phosphosulfate reductase
rifcsplowo2_01_scaffold_0_6

Not on your lists

comp(2629..3066)
-----------------
DNA (438bp)
protein (146aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL67021.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Thiamine biosynthesis protein ThiS id=2193626 bin=GWB2_CP_45_9 species=Clostridium sp. MSTE9 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
thiamine biosynthesis protein ThiS
rifcsplowo2_01_scaffold_0_7
Bacillus sp. JS, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3099..4016)
-----------------
DNA (918bp)
protein (306aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1127744 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Baci
CysK n=1 Tax=Bacillus sp. JS RepID=I0EZF4_9BACI
protein CysK
rifcsplowo2_01_scaffold_0_8
unknown

Not on your lists

comp(4023..4220)
-----------------
DNA (198bp)
protein (66aa)

This feature has no annotations

rifcsplowo2_01_scaffold_0_9
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

4281..5252
-----------------
DNA (972bp)
protein (324aa)
quinolinate synthetase complex subunit A; K03517 quinolinate synthase [EC:2.5.1.72] id=5097985 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
Quinolinate synthetase complex subunit A, quinolinate synthase {ECO:0000313|EMBL:KKT02780.1}; EC=2.5.1.72 {ECO:0000313|EMBL:KKT02780.1};; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="
quinolinate synthetase complex subunit A (EC:2.1.1.63)
rifcsplowo2_01_scaffold_0_10
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

5258..6106
-----------------
DNA (849bp)
protein (283aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
PP-loop domain containing protein id=5046311 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_0_11

Not on your lists

6236..6763
-----------------
DNA (528bp)
protein (176aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036C7731
Acetyltransferase, ribosomal protein N-acetylase {ECO:0000313|EMBL:KKT91781.1}; TaxID=1618914 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_45_13.;"
GCN5-related N-acetyltransferase
rifcsplowo2_01_scaffold_0_12
GWA2_Elusimicrobia_62_23_curated, Elusimicrobia, Bacteria

Not on your lists

6785..8314
-----------------
DNA (1530bp)
protein (510aa)
carbon monoxide dehydrogenase; K00198 carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.99.2] Tax=GWA2_Elusimicrobia_62_23_curated
Carbon-monoxide dehydrogenase, catalytic subunit n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BAN0_METIK
carbon-monoxide dehydrogenase, catalytic subunit
rifcsplowo2_01_scaffold_0_13
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

8367..8738
-----------------
DNA (372bp)
protein (124aa)
Tax=CG_Pacearch_04
rifcsplowo2_01_scaffold_0_14
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8796..9182
-----------------
DNA (387bp)
protein (129aa)
Thioredoxin n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11YX9_CYTH3
trxA; thioredoxin
trxA; putative thioredoxin Tax=RBG_13_Deltaproteobacteria_52_11_curated
rifcsplowo2_01_scaffold_0_15
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

9184..10539
-----------------
DNA (1356bp)
protein (452aa)
Glutamate dehydrogenase n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AHH7_PYRYC
glutamate dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=529709 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus yayanosii (strain
rifcsplowo2_01_scaffold_0_16
unknown

Not on your lists

comp(10706..10825)
-----------------
DNA (120bp)
protein (40aa)

This feature has no annotations

rifcsplowo2_01_scaffold_0_17
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

10991..12226
-----------------
DNA (1236bp)
protein (412aa)
enolase (EC:4.2.1.11)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E3B39
eno; phosphopyruvate hydratase Eno Tax=CG_Pacearch_04
rifcsplowo2_01_scaffold_0_18
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


12288..13046
-----------------
DNA (759bp)
protein (253aa)
30S ribosomal protein S2 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS2_NANEQ id=5102942 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RBG_13_Pacearchaeota_36_9_curated
30S ribosomal protein S2
rifcsplowo2_01_scaffold_0_19
unknown

Not on your lists

13117..13716
-----------------
DNA (600bp)
protein (200aa)

This feature has no annotations

rifcsplowo2_01_scaffold_0_20
GWA1_OD1_59_11, Parcubacteria, Bacteria

Not on your lists

13746..13961
-----------------
DNA (216bp)
protein (72aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RVX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKW48003.1}; TaxID=1618804 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_59_11.;"
hypothetical protein
rifcsplowo2_01_scaffold_0_21
unknown

Not on your lists

19158..19388
-----------------
DNA (231bp)
protein (77aa)

This feature has no annotations

rifcsplowo2_01_scaffold_0_22
unknown

Not on your lists

19409..19918
-----------------
DNA (510bp)
protein (170aa)

This feature has no annotations

rifcsplowo2_01_scaffold_0_23
unknown

Not on your lists

comp(19924..20265)
-----------------
DNA (342bp)
protein (114aa)

This feature has no annotations

rifcsplowo2_01_scaffold_0_24
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

Not on your lists

20335..20994
-----------------
DNA (660bp)
protein (220aa)
DNA repair proteins n=1 Tax=uncultured archaeon GZfos29E12 RepID=Q64AS5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKP30759.1}; TaxID=1618806 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_31_28.;"
radC; DNA repair protein RadC
rifcsplowo2_01_scaffold_0_25
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(20991..22439)
-----------------
DNA (1449bp)
protein (483aa)
N-6 DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=AR13
N-6 DNA methylase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D6M3_METSW
N-6 DNA methylase
rifcsplowo2_01_scaffold_0_26
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(22442..23125)
-----------------
DNA (684bp)
protein (228aa)
hypothetical protein
id=5103859 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_0_27
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

comp(23122..24321)
-----------------
DNA (1200bp)
protein (400aa)
Putative uncharacterized protein n=1 Tax=Bacillus smithii 7_3_47FAA RepID=G9QLC6_9BACI
type I restriction-modification system (specificity subunit) Tax=RIFOXYB2_FULL_RIF07_49_35_curated
hypothetical protein
rifcsplowo2_01_scaffold_0_28
unknown

Not on your lists

comp(24311..24835)
-----------------
DNA (525bp)
protein (175aa)

This feature has no annotations

rifcsplowo2_01_scaffold_0_29
unknown

Not on your lists

comp(24832..24999)
-----------------
DNA (168bp)
protein (56aa)

This feature has no annotations

rifcsplowo2_01_scaffold_0_30
unknown

Not on your lists

comp(25001..25660)
-----------------
DNA (660bp)
protein (220aa)

This feature has no annotations

Displaying items 1-30 of 679 in total

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