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bjp_ig2103_scaffold_20_curated

Search features with annotation key words

Displaying items 1-30 of 275 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_20_curated_1
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1..90)
DNA (90bp) protein (30aa)
Tetrahydromethanopterin S-methyltransferase subunit B {ECO:0000256|HAMAP-Rule:MF_01094}; EC=2.1.1.86 {ECO:0000256|HAMAP-Rule:MF_01094};; N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit B {ECO:0000256|HAMAP-Rule:MF_01094}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
Tetrahydromethanopterin S-methyltransferase subunit B n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HKM5_METFS
tetrahydromethanopterin S-methyltransferase, subunit B
bjp_ig2103_scaffold_20_curated_2
unknown

Not on your lists

comp(92..388)
DNA (297bp) protein (99aa)

This feature has no annotations

bjp_ig2103_scaffold_20_curated_3
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(390..1238)
DNA (849bp) protein (283aa)
Tetrahydromethanopterin S-methyltransferase subunit C {ECO:0000256|HAMAP-Rule:MF_01096}; EC=2.1.1.86 {ECO:0000256|HAMAP-Rule:MF_01096};; N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit C {ECO:0000256|HAMAP-Rule:MF_01096}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
Tetrahydromethanopterin S-methyltransferase subunit C n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HJX8_METFS rbh
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit C rbh
bjp_ig2103_scaffold_20_curated_4
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1249..2118)
DNA (870bp) protein (290aa)
tetrahydromethanopterin S-methyltransferase subunit D; K00580 tetrahydromethanopterin S-methyltransferase subunit D [EC:2.1.1.86] rbh
Tetrahydromethanopterin S-methyltransferase subunit D {ECO:0000256|HAMAP-Rule:MF_01097}; EC=2.1.1.86 {ECO:0000256|HAMAP-Rule:MF_01097};; N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit D {ECO:0000256|HAMAP-Rule:MF_01097}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
Tetrahydromethanopterin S-methyltransferase subunit D n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I5S9_METB6 rbh
bjp_ig2103_scaffold_20_curated_5
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2115..3011)
DNA (897bp) protein (299aa)
Tetrahydromethanopterin S-methyltransferase subunit E {ECO:0000256|HAMAP-Rule:MF_01098}; EC=2.1.1.86 {ECO:0000256|HAMAP-Rule:MF_01098};; N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit E {ECO:0000256|HAMAP-Rule:MF_01098}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
Tetrahydromethanopterin S-methyltransferase subunit E n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HIK2_METFS rbh
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit E rbh
bjp_ig2103_scaffold_20_curated_6
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3283..4095)
DNA (813bp) protein (271aa)
Ion channel n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HDE3_METFS rbh
Ion channel rbh
Ion channel {ECO:0000313|EMBL:AGB02040.1}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_20_curated_7
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4324..5025
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I7L1_METB6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS55722.1}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
bjp_ig2103_scaffold_20_curated_8
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5092..5694)
DNA (603bp) protein (201aa)
HhH-GPD superfamily base excision DNA repair protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HHV0_METFS rbh
HhH-GPD superfamily base excision DNA repair protein rbh
HhH-GPD superfamily base excision DNA repair protein {ECO:0000313|EMBL:AGB03605.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_20_curated_9
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5884..6159
DNA (276bp) protein (92aa)
Acylphosphatase n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HFE3_METFS
acylphosphatase
Acylphosphatase {ECO:0000313|EMBL:AGB02038.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_20_curated_10
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6268..6738
DNA (471bp) protein (157aa)
ruvC; Holliday junction resolvase; K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I4H4_METB6
Crossover junction endodeoxyribonuclease RuvC {ECO:0000313|EMBL:ABS54635.1}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
bjp_ig2103_scaffold_20_curated_11
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6743..7342
DNA (600bp) protein (200aa)
Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12]
Holliday junction DNA helicase RuvA n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I4H5_METB6
Holliday junction DNA helicase RuvA {ECO:0000313|EMBL:ABS54636.1}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
bjp_ig2103_scaffold_20_curated_12
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7347..8348
DNA (1002bp) protein (334aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=937775 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="Methanoplanus limicola DSM 2279.;"
ruvB; Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] rbh
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YZN3_9EURY rbh
bjp_ig2103_scaffold_20_curated_13
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8361..9428)
DNA (1068bp) protein (356aa)
Putative cobalamin binding protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HJN8_METFS
putative cobalamin binding protein
Putative cobalamin binding protein {ECO:0000313|EMBL:AGB03528.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_20_curated_14
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9556..10710)
DNA (1155bp) protein (385aa)
Putative peptide-modifying radical SAM enzyme, Mhun_1560 family n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HKM0_METFS rbh
putative peptide-modifying radical SAM enzyme, Mhun_1560 family rbh
Putative peptide-modifying radical SAM enzyme, Mhun_1560 family {ECO:0000313|EMBL:AGB03604.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_20_curated_15
unknown

Not on your lists

comp(10769..11278)
DNA (510bp) protein (170aa)

This feature has no annotations

bjp_ig2103_scaffold_20_curated_16
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11598..12455)
DNA (858bp) protein (286aa)
ATPase involved in chromosome partitioning n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HKA6_METFS
ATPase involved in chromosome partitioning
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:AGB03748.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_20_curated_17
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12477..14072)
DNA (1596bp) protein (532aa)
Methyl coenzyme M reductase system, component A2 n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HL18_METFS rbh
methyl coenzyme M reductase system, component A2 rbh
Methyl coenzyme M reductase system, component A2 {ECO:0000313|EMBL:AGB03749.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_20_curated_18
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14416..14790)
DNA (375bp) protein (125aa)
UPF0251 protein Metfor_2768 n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HJ03_METFS
putative DNA-binding protein
UPF0251 protein Metfor_2768 {ECO:0000256|HAMAP-Rule:MF_00674}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_20_curated_19
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14837..15169)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HGA1_METFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB03752.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_20_curated_20
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15206..15652)
DNA (447bp) protein (149aa)
Metal-binding protein-like protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CSM8_METMJ
metal-binding protein-like protein
Metal-binding protein-like protein {ECO:0000313|EMBL:ABN56378.1}; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1).;"
bjp_ig2103_scaffold_20_curated_21
unknown

Not on your lists

15703..15945
DNA (243bp) protein (81aa)

This feature has no annotations

bjp_ig2103_scaffold_20_curated_22
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16070..16921
DNA (852bp) protein (284aa)
Metal dependent hydrolase n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6DQC3_BACAZ
Metal dependent hydrolase {ECO:0000313|EMBL:EKN70398.1}; TaxID=1131731 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus azotoformans LMG 9581.;"
metallo-beta-lactamase superfamily protein; K06897
bjp_ig2103_scaffold_20_curated_23
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16944..17750)
DNA (807bp) protein (269aa)
ABC-3 protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CTP7_METMJ rbh
ABC-3 protein; K09816 zinc transport system permease protein rbh
ABC-3 protein {ECO:0000313|EMBL:ABN56747.1}; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1).;"
bjp_ig2103_scaffold_20_curated_24
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17753..18523)
DNA (771bp) protein (257aa)
ABC transporter-related protein; K09817 zinc transport system ATP-binding protein [EC:3.6.3.-] rbh
Zinc transport system ATP-binding protein {ECO:0000313|EMBL:CCJ35791.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCJ35791.1};; TaxID=1201294 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 /; MS2) (Methanogenium bourgense).;"
Zinc transport system ATP-binding protein n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7KC16_METBM rbh
bjp_ig2103_scaffold_20_curated_25
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18524..19498)
DNA (975bp) protein (325aa)
Putative zinc transport system zinc-binding lipoprotein adcA n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LJA7_METBM rbh
zinc transport system zinc-binding lipoprotein adcA rbh
ABC-type metal ion transport system, periplasmic component {ECO:0000313|EMBL:CCJ35792.1}; TaxID=1201294 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 /; MS2) (Methanogenium bourgense).;"
bjp_ig2103_scaffold_20_curated_26
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19534..19992)
DNA (459bp) protein (153aa)
Mn-dependent transcriptional regulator n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HKU9_METFS
Mn-dependent transcriptional regulator
Mn-dependent transcriptional regulator {ECO:0000313|EMBL:AGB03669.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_20_curated_27
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20090..21049)
DNA (960bp) protein (320aa)
Radical SAM domain protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GEC3_METPE rbh
radical SAM protein rbh
Radical SAM domain protein {ECO:0000313|EMBL:ACL17624.1}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c).;"
bjp_ig2103_scaffold_20_curated_28
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21251..21733
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HJX2_METFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB03603.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_20_curated_29
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22258..23946)
DNA (1689bp) protein (563aa)
coenzyme-B sulfoethylthiotransferase (EC:2.8.4.1); K00399 methyl-coenzyme M reductase alpha subunit [EC:2.8.4.1] rbh
Coenzyme-B sulfoethylthiotransferase {ECO:0000313|EMBL:ABS55100.1}; EC=2.8.4.1 {ECO:0000313|EMBL:ABS55100.1};; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
Coenzyme-B sulfoethylthiotransferase n=2 Tax=Methanomicrobiales RepID=A7I5T9_METB6 rbh
bjp_ig2103_scaffold_20_curated_30
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23953..24717)
DNA (765bp) protein (255aa)
methyl-coenzyme M reductase subunit gamma; K00402 methyl-coenzyme M reductase gamma subunit [EC:2.8.4.1] rbh
Methyl-coenzyme M reductase, gamma subunit n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I5U0_METB6 rbh
Methyl-coenzyme M reductase, gamma subunit {ECO:0000313|EMBL:ABS55101.1}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
Displaying items 1-30 of 275 in total

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