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bjp_ig2103_scaffold_2098_curated_14

Organism: BJP_Ig2103_Hor_218_2014_Methanoregula_55_19_curated

near complete RP 35 / 55 MC: 8 BSCG 22 / 51 MC: 1 ASCG 38 / 38
Location: comp(10622..11503)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HCU2_METFS similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 301.0
  • Bit_score: 379
  • Evalue 3.00e-102
  • rbh
PAS domain S-box similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 301.0
  • Bit_score: 379
  • Evalue 9.30e-103
  • rbh
PAS domain S-box {ECO:0000313|EMBL:AGB01835.1}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 301.0
  • Bit_score: 379
  • Evalue 6.00e-102

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Taxonomy

Methanoregula formicica → Methanoregula → Methanomicrobiales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 882
ATGGATACCACGGACGCAGAATACCGTAATCTTGTGGAACAGCAGCAGGATCTCATCGTGAAAGTCAGCCTTGAAGGAAGGCTTGAATTTGCCAATACTGCCTATGCCGAACTGCTCAAAAAAACAAAAGACGAGCTGCTGGGCAGCGTCTTCATGCCGGTATCCGATGAGCGATACTCAGATGTTGTCGCAACCCAGATGACCCGGCTCTTCCGGCCGCCGTATACCTGCATCGTGGAGCAGTGGCTCCAGACGGCGAGAGGGCTCCGGTGCATCAGCTGGTCGATCCGGTCGGTCCTTGACGCGGACAACACTCCTGTTGCGCTCGTAGCAACCGGCCGTGACATGACCCCGCTCAAGAACGACCTGAAGGCCACAAAGAAGCGGGACGAGGAACTGATGCTCCTCATCGAGAGCGGCCCGCAGATGTATTATGCCCATACCCCCGACCACCGCACTACCTTCATCAGCCCCCGGATCCGCTCGCTCCTGAAATGCTCAAACGACAAGAAGAAGCGGTCATGGACCGACTACCTCACCGATAACCCGGTCAACGCCGCCGGTCTCGAACGCACCCTGCGGGCGGTATCAACCGGAAAACGCGAACCCCCGTACCGGCTGGAGATGGAAGCGGAGGACGGGAGGAGAATCTGGATCGAGGTCAACGAGATCCCGGTGGTAAAAAATGGCAAGACGGTGGCAATCGTCGGCTCGCTCATCGATATCACCGAGAAGATGCATGTCGATGAAGGGATTGAAGAAGCGGAGATCCTCTTCAAGGGTGTCCGGCCAAAGGAGCCAAAAGCGGCAGGGCGCTCCCCGCTCAGGGCAATCCGCTCGATATTTGGCCGGGACGAGGGAGCGGAAGAGGAGTCGGTATAA
PROTEIN sequence
Length: 294
MDTTDAEYRNLVEQQQDLIVKVSLEGRLEFANTAYAELLKKTKDELLGSVFMPVSDERYSDVVATQMTRLFRPPYTCIVEQWLQTARGLRCISWSIRSVLDADNTPVALVATGRDMTPLKNDLKATKKRDEELMLLIESGPQMYYAHTPDHRTTFISPRIRSLLKCSNDKKKRSWTDYLTDNPVNAAGLERTLRAVSTGKREPPYRLEMEAEDGRRIWIEVNEIPVVKNGKTVAIVGSLIDITEKMHVDEGIEEAEILFKGVRPKEPKAAGRSPLRAIRSIFGRDEGAEEESV*