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bjp_ig2103_scaffold_2098_curated

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_2098_curated_1
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1..291)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CX16_METMJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN57916.1}; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1).;"
bjp_ig2103_scaffold_2098_curated_2
unknown

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comp(403..1101)
DNA (699bp) protein (233aa)

This feature has no annotations

bjp_ig2103_scaffold_2098_curated_3
unknown

Not on your lists

comp(1112..1933)
DNA (822bp) protein (274aa)

This feature has no annotations

bjp_ig2103_scaffold_2098_curated_4
unknown

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comp(1998..2603)
DNA (606bp) protein (202aa)

This feature has no annotations

bjp_ig2103_scaffold_2098_curated_5
Shewanella violacea, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2627..3889)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Thalassiosira oceanica RepID=K0R8D2_THAOC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ03497.1}; TaxID=637905 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 /; DSS12).;"
bjp_ig2103_scaffold_2098_curated_6
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4378..4680)
DNA (303bp) protein (101aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020};; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HDH5_METFS
phosphoribosyl-ATP pyrophosphohydrolase
bjp_ig2103_scaffold_2098_curated_7
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4677..5120)
DNA (444bp) protein (148aa)
NusA family KH domain protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7IA26_METB6
NusA family protein; K02600 N utilization substance protein A
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
bjp_ig2103_scaffold_2098_curated_8
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5272..6012)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HFI1_METFS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB01839.1}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_2098_curated_9
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6239..7489
DNA (1251bp) protein (417aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEU9_METFS rbh
homoaconitate hydratase family protein/3-isopropylmalate dehydratase, large subunit rbh
bjp_ig2103_scaffold_2098_curated_10
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7491..8045
DNA (555bp) protein (185aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
3-isopropylmalate dehydratase small subunit n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HAR8_METFS rbh
3-isopropylmalate dehydratase, small subunit rbh
bjp_ig2103_scaffold_2098_curated_11
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8033..9154
DNA (1122bp) protein (374aa)
Isocitrate/isopropylmalate dehydrogenase n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HDH1_METFS rbh
isocitrate/isopropylmalate dehydrogenase rbh
Isocitrate/isopropylmalate dehydrogenase {ECO:0000313|EMBL:AGB01836.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_2098_curated_12
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9381..9953)
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I900_METB6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS56211.1}; Flags: Precursor;; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
bjp_ig2103_scaffold_2098_curated_13
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

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comp(10062..10586)
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z689_DEHE1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW39203.1}; TaxID=243164 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195); (Dehalococcoides ethenogenes (strain 195)).;"
bjp_ig2103_scaffold_2098_curated_14
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10622..11503)
DNA (882bp) protein (294aa)
PAS domain S-box n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HCU2_METFS rbh
PAS domain S-box rbh
PAS domain S-box {ECO:0000313|EMBL:AGB01835.1}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_2098_curated_15
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11673..12080)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HFH6_METFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB01834.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_2098_curated_16
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12181..13308)
DNA (1128bp) protein (376aa)
Nitrogenase molybdenum-iron protein, alpha and beta chains n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEU4_METFS rbh
nitrogenase molybdenum-iron protein, alpha and beta chains rbh
Nitrogenase molybdenum-iron protein, alpha and beta chains {ECO:0000313|EMBL:AGB01833.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_2098_curated_17
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13301..14341)
DNA (1041bp) protein (347aa)
Nitrogenase molybdenum-iron protein, alpha and beta chains n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HAR2_METFS rbh
nitrogenase molybdenum-iron protein, alpha and beta chains rbh
Nitrogenase molybdenum-iron protein, alpha and beta chains {ECO:0000313|EMBL:AGB01832.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_2098_curated_18
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14307..15119)
DNA (813bp) protein (271aa)
Nitrogenase subunit NifH (ATPase) n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HDG5_METFS rbh
nitrogenase subunit NifH (ATPase) rbh
Nitrogenase subunit NifH (ATPase) {ECO:0000313|EMBL:AGB01831.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_2098_curated_19
unknown

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comp(15311..15436)
DNA (126bp) protein (42aa)

This feature has no annotations

bjp_ig2103_scaffold_2098_curated_20
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15447..15950)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HFV9_METFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB01979.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_2098_curated_21
unknown

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16082..16291
DNA (210bp) protein (70aa)

This feature has no annotations

bjp_ig2103_scaffold_2098_curated_22
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16231..16722)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HF81_METFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB01978.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
Displaying 22 items

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