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qh_10_scaffold_3913

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_3913_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..111)
DNA (111bp) protein (37aa)
beta-lactamase domain-containing protein id=24650028 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Zn-dependent hydrolase {ECO:0000313|EMBL:ERH11106.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qh_10_scaffold_3913_2
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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565..885
DNA (321bp) protein (107aa)
DNA-binding protein n=1 Tax=Haloarcula hispanica N601 RepID=V5TM00_HALHI
DNA-binding protein
HoxA-like transcriptional regulator / response regulator receiver protein {ECO:0000313|EMBL:AEM57327.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
qh_10_scaffold_3913_3
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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869..1549
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=V5TNH2_HALHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF27487.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qh_10_scaffold_3913_4
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1623..2207
DNA (585bp) protein (195aa)
Type 12 methyltransferase n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BJG0_9EURY
Type 12 methyltransferase {ECO:0000313|EMBL:ELZ11006.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
type 12 methyltransferase
qh_10_scaffold_3913_5
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2294..2698
DNA (405bp) protein (135aa)
transcriptional regulator, ArsR family id=24654298 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Putative transcriptional regulator {ECO:0000313|EMBL:ERG88576.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;
transcriptional regulator
qh_10_scaffold_3913_6
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2906..4027
DNA (1122bp) protein (374aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYX3_HALVA
qh_10_scaffold_3913_7
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4163..4846
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0STM0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB62844.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
qh_10_scaffold_3913_8
unknown

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4909..5073
DNA (165bp) protein (55aa)

This feature has no annotations

qh_10_scaffold_3913_9
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5051..5350
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DP13_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK37979.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
qh_10_scaffold_3913_10
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5347..5682
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NSN4_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV13150.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
qh_10_scaffold_3913_11
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5701..6891)
DNA (1191bp) protein (397aa)
Spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IZ22_HALVA
Spermidine/putrescine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA01976.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" so
ABC transporter
qh_10_scaffold_3913_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7142..8224
DNA (1083bp) protein (361aa)
cheB; protein-glutamate methylesterase CheB (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=268739 species="Archaea; Euryarchaeota; Halobact
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRK0_NATM8
qh_10_scaffold_3913_13
unknown

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comp(8619..8705)
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 13 items

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