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qh_10_scaffold_420

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_420_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(337..639)
DNA (303bp) protein (101aa)
IS240-type transposase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPU5_NATM8
IS240-type transposase
ISH14-type transposase ISNamo9 {ECO:0000313|EMBL:CCQ36035.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
qh_10_scaffold_420_2
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1305..1685
DNA (381bp) protein (127aa)
Deoxyribonuclease/rho motif-related TRAM n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0ENR3_9EURY
Deoxyribonuclease/rho motif-related TRAM {ECO:0000313|EMBL:ELZ48009.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum cal
deoxyribonuclease/rho motif-related TRAM
qh_10_scaffold_420_3
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1823..2062
DNA (240bp) protein (80aa)
hypothetical protein id=24654691 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG89659.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
qh_10_scaffold_420_4
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2147..3301)
DNA (1155bp) protein (385aa)
Neutral proteinase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGB4_9EURY
transposase (IS891/IS1136/IS1341/IS605)
Neutral proteinase {ECO:0000313|EMBL:ERJ05386.1}; Transposase (IS891/IS1136/IS1341/IS605) {ECO:0000313|EMBL:CCQ33142.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
qh_10_scaffold_420_5
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3241..3546)
DNA (306bp) protein (102aa)
Neutral proteinase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGB4_9EURY
transposase (IS891/IS1136/IS1341/IS605)
Neutral proteinase {ECO:0000313|EMBL:ERJ05386.1}; Transposase (IS891/IS1136/IS1341/IS605) {ECO:0000313|EMBL:CCQ33142.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
qh_10_scaffold_420_6
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3694..4311)
DNA (618bp) protein (206aa)
Uncharacterized protein conserved in archaea n=1 Tax=halophilic archaeon J07HX5 RepID=U1P7X2_9EURY
Uncharacterized protein conserved in archaea {ECO:0000313|EMBL:ERG89662.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
transcriptional regulator
qh_10_scaffold_420_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4393..5529)
DNA (1137bp) protein (379aa)
hypothetical protein id=24644890 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
SPFH domain, Band 7 family protein {ECO:0000313|EMBL:ERH09103.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_10_scaffold_420_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5618..6181)
DNA (564bp) protein (188aa)
hypothetical protein id=24644730 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Membrane protein implicated in regulation of membrane protease activity {ECO:0000313|EMBL:ERH08944.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophili
hypothetical protein
qh_10_scaffold_420_9
unknown

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comp(6269..6487)
DNA (219bp) protein (73aa)

This feature has no annotations

qh_10_scaffold_420_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6540..7394)
DNA (855bp) protein (285aa)
Purine nucleoside permease n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y3S6_NATM8
purine nucleoside permease
Purine nucleoside permease domain protein {ECO:0000313|EMBL:CCQ37176.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronom
qh_10_scaffold_420_11
unknown

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8006..8551
DNA (546bp) protein (182aa)

This feature has no annotations

qh_10_scaffold_420_12
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8642..9139)
DNA (498bp) protein (166aa)
hypothetical protein id=24654709 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG89673.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
qh_10_scaffold_420_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9180..9845)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1QTX0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10728.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
cell division inhibitor MinD-like (chromosome partitioning ATPase)
qh_10_scaffold_420_14
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9987..10874
DNA (888bp) protein (296aa)
aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1033806 species="Ar
Aspartate carbamoyltransferase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKD5_9EURY
qh_10_scaffold_420_15
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10871..11335
DNA (465bp) protein (155aa)
Aspartate carbamoyltransferase regulatory subunit {ECO:0000313|EMBL:AKH98071.1}; EC=2.1.3.2 {ECO:0000313|EMBL:AKH98071.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
aspartate carbamoyltransferase regulatory subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase regulatory chain n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YVA3_9EURY
qh_10_scaffold_420_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11364..12224)
DNA (861bp) protein (287aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM15_9EURY
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:EMA46706.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
qh_10_scaffold_420_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12611..13234)
DNA (624bp) protein (208aa)
DEAD/H associated domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NY75_HALMD
DEAD/DEAH box helicase
DEAD/H associated domain protein {ECO:0000313|EMBL:ACV48535.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mu
Displaying 17 items

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