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qh_10_scaffold_3890

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_3890_1
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..484)
DNA (483bp) protein (161aa)
translation initiation factor IF-6; K03264 translation initiation factor 6 id=24654821 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" sourc
translation initiation factor eIF-6
qh_10_scaffold_3890_2
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(487..765)
DNA (279bp) protein (93aa)
50S ribosomal protein L31e; K02910 large subunit ribosomal protein L31e id=24654822 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
ribosomal protein L31E
qh_10_scaffold_3890_3
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(762..914)
DNA (153bp) protein (51aa)
rpl39e; 50S ribosomal protein L39e; K02924 large subunit ribosomal protein L39e id=24654823 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
50S ribosomal protein L39e {ECO:0000256|HAMAP-Rule:MF_00629}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
rpl39e; 50S ribosomal protein L39e
qh_10_scaffold_3890_4
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1004..1567)
DNA (564bp) protein (188aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=634497 species="Ar
2'-5' RNA ligase n=2 Tax=Haloarcula hispanica RepID=G0HSY3_HALHT
2'-5' RNA ligase
qh_10_scaffold_3890_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1741..2286
DNA (546bp) protein (182aa)
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ERH08687.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
TPR repeat-containing protein id=24647550 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
TPR repeat-containing protein
qh_10_scaffold_3890_6
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2288..2587
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1MZY6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG89770.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
qh_10_scaffold_3890_7
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2682..3881
DNA (1200bp) protein (400aa)
cysteine desulfurase, SufS subfamily protein (EC:2.8.1.7) id=24654828 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Cysteine desulfurase, SufSfamily {ECO:0000313|EMBL:ERG89771.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
cysteine desulfurase, SufS subfamily
qh_10_scaffold_3890_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3903..4901
DNA (999bp) protein (333aa)
aryl-alcohol dehydrogenase (EC:1.1.1.91)
oxidoreductase id=24648827 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Putative oxidoreductase {ECO:0000313|EMBL:ERH09959.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qh_10_scaffold_3890_9
Spiribacter salinus, Spiribacter, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5006..5392)
DNA (387bp) protein (129aa)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Spiribacter salinus M19-40 RepID=R4VI06_9GAMM
protein-L-isoaspartate(D-aspartate) O-methyltransferase
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:AGM40242.1}; TaxID=1260251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Spiri
qh_10_scaffold_3890_10
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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5466..5786
DNA (321bp) protein (107aa)
Chloromuconate cycloisomerase (EC:5.5.1.7)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W0C4_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ELY42751.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natron
qh_10_scaffold_3890_11
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5854..6843
DNA (990bp) protein (330aa)
Putative DNA modification methylase n=1 Tax=halophilic archaeon J07HX5 RepID=U1P889_9EURY
Putative DNA modification methylase {ECO:0000313|EMBL:ERG89772.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
qh_10_scaffold_3890_12
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6856..7416)
DNA (561bp) protein (187aa)
UPF0218 protein J07HX5_01945 n=1 Tax=halophilic archaeon J07HX5 RepID=U1N0C5_9EURY
UPF0218 protein J07HX5_01945 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
qh_10_scaffold_3890_13
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7424..7621)
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit E' (EC:2.7.7.6) id=24654831 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
DNA-directed RNA polymerase subunit E, RpoE2
qh_10_scaffold_3890_14
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7621..8202)
DNA (582bp) protein (194aa)
DNA-directed RNA polymerase subunit E'; K03049 DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] id=24654832 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
DNA-directed RNA polymerase, rpoE {ECO:0000313|EMBL:ERG89775.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
DNA-directed RNA polymerase subunit E'
qh_10_scaffold_3890_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8219..8608)
DNA (390bp) protein (130aa)
SSU processome protein Utp24 n=1 Tax=halophilic archaeon J07HX64 RepID=U1QT57_9EURY
SSU processome protein Utp24 {ECO:0000313|EMBL:ERH10408.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_10_scaffold_3890_16
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8605..10002)
DNA (1398bp) protein (466aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KY76_9EURY
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1227499 species="Arc
translation initiation factor 2 subunit gamma
Displaying 16 items

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