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qh_1_scaffold_477

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_477_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..765
DNA (765bp) protein (255aa)
30S ribosomal protein S3 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKJ1_9EURY
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
30S ribosomal protein S3e (S3p)
qh_1_scaffold_477_2
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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762..983
DNA (222bp) protein (74aa)
50S ribosomal protein L29P n=1 Tax=Halonotius sp. J07HN6 RepID=U1NT77_9EURY
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
50S ribosomal protein L29P
qh_1_scaffold_477_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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984..1271
DNA (288bp) protein (96aa)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|H
ribonuclease P n=1 Tax=Halomicrobium katesii RepID=UPI00037B98D9
ribonuclease P, Rpp29
qh_1_scaffold_477_4
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1262..1651
DNA (390bp) protein (130aa)
30S ribosomal protein S17P n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LFH1_9EURY
30S ribosomal protein S17P {ECO:0000313|EMBL:ELY76722.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
30S ribosomal protein S17
qh_1_scaffold_477_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1651..2049
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMN3_9EURY
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
rpl14; 50S ribosomal protein L14
qh_1_scaffold_477_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2046..2408
DNA (363bp) protein (121aa)
50S ribosomal protein L24P n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFI8_9EURY
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
50S ribosomal protein L24
qh_1_scaffold_477_7
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2401..3138
DNA (738bp) protein (246aa)
30S ribosomal protein S4e n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KCA5_HALAR
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinen
rps4E; 30S ribosomal protein S4
qh_1_scaffold_477_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3135..3662
DNA (528bp) protein (176aa)
Ribosomal protein S4E n=1 Tax=halophilic archaeon J07HX64 RepID=U1P2T1_9EURY
Ribosomal protein S4E {ECO:0000313|EMBL:ERH10985.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rpl5p; 50S ribosomal protein L5
qh_1_scaffold_477_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3659..3838
DNA (180bp) protein (60aa)
30S ribosomal protein S14 type Z n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIM3_9EURY
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex ca
rps14; 30S ribosomal protein S14
qh_1_scaffold_477_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3835..4227
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4D5_HALMD
rps8p; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoha
qh_1_scaffold_477_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4275..4802
DNA (528bp) protein (176aa)
50S ribosomal protein L6 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKI2_9EURY
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
rpl6p; 50S ribosomal protein L6
qh_1_scaffold_477_12
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4802..6004
DNA (1203bp) protein (401aa)
50S ribosomal protein L32e n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8Y2_9EURY
50S ribosomal protein L32e
50S ribosomal protein L32e {ECO:0000313|EMBL:AGN02183.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bs
qh_1_scaffold_477_13
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6001..6450
DNA (450bp) protein (150aa)
50S ribosomal protein L19e n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K8G9_9EURY
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolyti
rpl19e; 50S ribosomal protein L19e
qh_1_scaffold_477_14
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6450..7010
DNA (561bp) protein (187aa)
50S ribosomal protein L18P n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=RL18_HALMA
rpl18p; 50S ribosomal protein L18
50S ribosomal protein L18; Hl12; Hmal18; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (strain ATCC 43049
qh_1_scaffold_477_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7007..7651
DNA (645bp) protein (215aa)
30S ribosomal protein S5 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS5_NATPD
rps5p; 30S ribosomal protein S5P
30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
qh_1_scaffold_477_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7648..8112
DNA (465bp) protein (155aa)
rpl30p; 50S ribosomal protein L30P; K02907 large subunit ribosomal protein L30 id=24646827 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
rpl30p; 50S ribosomal protein L30P
qh_1_scaffold_477_17
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8112..8609
DNA (498bp) protein (166aa)
50S ribosomal protein L15P n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKR4_9EURY
50S ribosomal protein L27Ae (L15p)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea
qh_1_scaffold_477_18
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8611..10077
DNA (1467bp) protein (489aa)
Protein translocase subunit SecY n=1 Tax=halophilic archaeon J07HX64 RepID=U1PLJ6_9EURY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Protein transport protein SEC61 subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=108502
secY; preprotein translocase subunit SecY (TC 3.A.5.1.1)
qh_1_scaffold_477_19
unknown

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10235..10756
DNA (522bp) protein (174aa)

This feature has no annotations

qh_1_scaffold_477_20
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10804..11037
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J0S4_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01948.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qh_1_scaffold_477_21
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(11052..11249)
DNA (198bp) protein (66aa)
HAD-superfamily hydrolase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C390_9EURY
HAD-superfamily hydrolase {ECO:0000313|EMBL:ELZ17756.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 138
haloacid dehydrogenase-like hydrolase
Displaying 21 items

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