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qh_1_scaffold_489

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_489_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1217..2137)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N733_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52480.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_1_scaffold_489_2
unknown

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comp(2144..2410)
DNA (267bp) protein (89aa)

This feature has no annotations

qh_1_scaffold_489_3
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2568..4070
DNA (1503bp) protein (501aa)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HC34_9EURY
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
inosine-5-monophosphate dehydrogenase
qh_1_scaffold_489_4
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4121..6895)
DNA (2775bp) protein (925aa)
Serine protease protein n=1 Tax=Rhodopirellula europaea 6C RepID=M2BB51_9PLAN
Serine protease protein {ECO:0000313|EMBL:EMB18888.1}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula eu
hypothetical protein
qh_1_scaffold_489_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7057..7827)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L6N0_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA29252.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
3-isopropylmalate dehydratase
qh_1_scaffold_489_6
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7831..8013)
DNA (183bp) protein (61aa)
Ribosome biogenesis protein Nop10 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D3A1_HALXS
ribosome biogenesis protein Nop10
Ribosome biogenesis protein Nop10 {ECO:0000256|HAMAP-Rule:MF_00803}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis
qh_1_scaffold_489_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8167..8967)
DNA (801bp) protein (267aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LBB4_HALJP
Translation initiation factor 2 subunit alpha {ECO:0000256|HAMAP-Rule:MF_00231}; aIF2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; eIF-2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; TaxID=1227453 species="Arc
eif2A; translation initiation factor IF-2 subunit alpha
qh_1_scaffold_489_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9049..9246)
DNA (198bp) protein (66aa)
30S ribosomal protein S27e n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQ44_9EURY
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinen
30S ribosomal protein S27E
qh_1_scaffold_489_9
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9248..9526)
DNA (279bp) protein (93aa)
50S ribosomal protein L44e n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3ADM3_9EURY
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1
ribosomal protein L44E
qh_1_scaffold_489_10
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9708..9974
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J675_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15793.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qh_1_scaffold_489_11
unknown

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10014..10130
DNA (117bp) protein (39aa)

This feature has no annotations

qh_1_scaffold_489_12

Not on your lists

comp(10606..10809)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y9U4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS11723.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
qh_1_scaffold_489_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10936..12045
DNA (1110bp) protein (370aa)
Small GTP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIK2_9EURY
Small GTP-binding protein {ECO:0000313|EMBL:EMA45193.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu
drg; GTP-binding protein
Displaying 13 items

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