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qh_1_scaffold_2406

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_2406_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..280)
DNA (279bp) protein (93aa)
ATPase, type iv secretory pathway virb11 component like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CBH4_9EURY
ATPase, type iv secretory pathway virb11 component like protein {ECO:0000313|EMBL:ELZ20631.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimple
ATPase
qh_1_scaffold_2406_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(394..510)
DNA (117bp) protein (39aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=797114 species="Archaea; E
Methionine--tRNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CC75_9EURY
Suspect SCG annotation. See neighboring gene [qh_1_scaffold_2406_3].
qh_1_scaffold_2406_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(468..1460)
DNA (993bp) protein (331aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=797114 species="Archaea; E
Methionine--tRNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CC75_9EURY
metG; methionyl-tRNA synthetase
qh_1_scaffold_2406_4
Halorubrum_J07HR59, Halorubrum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1651..2451
DNA (801bp) protein (267aa)
Uncharacterized protein (Fragment) id=24637585 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
Uncharacterized protein (Fragment) id=24637585 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
qh_1_scaffold_2406_5
unknown

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comp(2858..3064)
DNA (207bp) protein (69aa)

This feature has no annotations

qh_1_scaffold_2406_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3086..3391)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAH3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20240.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_1_scaffold_2406_7
unknown

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comp(3388..3495)
DNA (108bp) protein (36aa)

This feature has no annotations

qh_1_scaffold_2406_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3492..3776)
DNA (285bp) protein (95aa)
Transcriptional regulator, arsr family protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAB8_9EURY
Transcriptional regulator, arsr family protein {ECO:0000313|EMBL:ELZ20241.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halo
ArsR family transcriptional regulator
qh_1_scaffold_2406_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3836..3967)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1QTI8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH09102.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
L-tyrosine decarboxylase
qh_1_scaffold_2406_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4400..4774)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAH8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20245.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qh_1_scaffold_2406_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4905..5645
DNA (741bp) protein (247aa)
probable oxidoreductase (short-chain dehydrogenase family) (EC:1.1.1.-)
Oxidoreductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAC3_9EURY
Oxidoreductase {ECO:0000313|EMBL:ELZ20246.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
Displaying 11 items

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