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qh_1_scaffold_6557

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_6557_1
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3..143
DNA (141bp) protein (47aa)
50S ribosomal protein L22P n=2 Tax=Haloterrigena RepID=D2RU02_HALTV
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" s
qh_1_scaffold_6557_2
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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692..883
DNA (192bp) protein (64aa)
30S ribosomal protein S3 n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BCG3_9EURY
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624
30S ribosomal protein S3
qh_1_scaffold_6557_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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964..1170
DNA (207bp) protein (69aa)
50S ribosomal protein L29P n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZU9_9EURY
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucih
50S ribosomal protein L29
qh_1_scaffold_6557_4
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1240..1695
DNA (456bp) protein (152aa)
rnpA; ribonuclease P subunit P29 (EC:3.1.26.5)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|H
Ribonuclease P subunit P29 n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R7Q1_HALMT
qh_1_scaffold_6557_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1686..2015
DNA (330bp) protein (110aa)
30S ribosomal protein S17P n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DH85_9EURY
30S ribosomal protein S17P {ECO:0000313|EMBL:ELZ33509.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidu
30S ribosomal protein S17
qh_1_scaffold_6557_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2015..2413
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=2 Tax=Halorhabdus RepID=C7NV57_HALUD
rpl14p; 50S ribosomal protein L14P
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea
qh_1_scaffold_6557_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2416..2775
DNA (360bp) protein (120aa)
50S ribosomal protein L24P n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFI8_9EURY
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
rpl24p; 50S ribosomal protein L24
qh_1_scaffold_6557_8
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2768..3094
DNA (327bp) protein (109aa)
30S ribosomal protein S4e n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y275_9EURY
30S ribosomal protein S4
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.
qh_1_scaffold_6557_9
unknown

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comp(2938..3354)
DNA (417bp) protein (139aa)

This feature has no annotations

qh_1_scaffold_6557_10
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3837..4013
DNA (177bp) protein (59aa)
30S ribosomal protein S14 type Z n=2 Tax=Halovivax RepID=L0IE95_HALRX
ribosomal protein S14
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strai
qh_1_scaffold_6557_11
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4016..4408
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LJV9_9EURY
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
qh_1_scaffold_6557_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4411..4797
DNA (387bp) protein (129aa)
50S ribosomal protein L6 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKI2_9EURY
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
rpl6p; 50S ribosomal protein L6P
Displaying 12 items

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