ggKbase home page

qh_1_scaffold_3468

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_3468_1
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2..868)
DNA (867bp) protein (289aa)
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 id=24641738 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobac
rplP0; acidic ribosomal protein P0
qh_1_scaffold_3468_2
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(865..1503)
DNA (639bp) protein (213aa)
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 id=24652081 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000256|SAAS:SAAS00010815}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J
rpl1P; 50S ribosomal protein L1
qh_1_scaffold_3468_3
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1813..2412)
DNA (600bp) protein (200aa)
DNA-binding protein n=1 Tax=Haloarcula hispanica N601 RepID=V5TM00_HALHI
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AJF27225.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qh_1_scaffold_3468_4
unknown

Not on your lists

2620..3081
DNA (462bp) protein (154aa)

This feature has no annotations

qh_1_scaffold_3468_5
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3005..3418)
DNA (414bp) protein (138aa)
pncA; isochorismatase family protein
Isochorismatase family protein {ECO:0000313|EMBL:CAJ52352.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi
pncA; isochorismatase family protein id=24628954 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
qh_1_scaffold_3468_6
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3484..3654)
DNA (171bp) protein (57aa)
Nicotinamidase-like amidase n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1PPP3_9EURY
Nicotinamidase-like amidase {ECO:0000313|EMBL:ERG94286.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J0
pncA; isochorismatase family protein
qh_1_scaffold_3468_7

Not on your lists

3951..4265
DNA (315bp) protein (105aa)
Transcriptional regulator, HxlR family n=1 Tax=uncultured archaeon A07HR60 RepID=V4YBT3_9ARCH
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ESS10426.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
transcription regulator
qh_1_scaffold_3468_8
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4806..5213
DNA (408bp) protein (136aa)
DNA binding protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0IXX7_9EURY
DNA binding protein {ECO:0000313|EMBL:EMA01566.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 35960.;"
DNA binding protein
qh_1_scaffold_3468_9
unknown

Not on your lists

comp(5156..5470)
DNA (315bp) protein (105aa)

This feature has no annotations

Displaying 9 items

View Taxonomy