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qh_1_scaffold_6199

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_6199_1
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..257
DNA (255bp) protein (85aa)
aspB2; aspartate aminotransferase (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1] id=24614350 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
PLP-dependent aminotransferase ( aspartate aminotransferase ) {ECO:0000313|EMBL:ESP89120.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus
class I and II aminotransferase
qh_1_scaffold_6199_2
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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335..1444
DNA (1110bp) protein (370aa)
aminotransferase class V id=24614351 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Selenocysteine lyase {ECO:0000313|EMBL:ESP89121.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum
aminotransferase class V
qh_1_scaffold_6199_3

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comp(1499..1729)
DNA (231bp) protein (77aa)
snoRNP protein GAR1 n=1 Tax=uncultured archaeon A07HR67 RepID=V4XRJ5_9ARCH
snoRNP protein GAR1 {ECO:0000313|EMBL:ESS02666.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
gar1; tRNA/rRNA pseudouridine synthase complex protein Gar1
qh_1_scaffold_6199_4
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1729..2031)
DNA (303bp) protein (101aa)
Signal recognition particle 19 kDa protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DPW0_9EURY
Signal recognition particle 19 kDa protein {ECO:0000256|HAMAP-Rule:MF_00305}; Short=SRP19 {ECO:0000256|HAMAP-Rule:MF_00305};; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales
ribonucleoprotein complex SRP, Srp19 component
qh_1_scaffold_6199_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2329..2544
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NY13_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48473.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qh_1_scaffold_6199_6
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2581..2880
DNA (300bp) protein (100aa)
Plasmid stabilization system n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HXP7_9EURY
Plasmid stabilization system {ECO:0000313|EMBL:ELZ88472.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA
hypothetical protein
qh_1_scaffold_6199_7
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2980..4560)
DNA (1581bp) protein (527aa)
ABC transporter periplasmic protein; K02016 iron complex transport system substrate-binding protein id=24652954 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
ABC-type Fe3+-hydroxamate transport system, periplasmic component {ECO:0000313|EMBL:ERH13466.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic arch
ABC transporter periplasmic protein
qh_1_scaffold_6199_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4813..5604
DNA (792bp) protein (264aa)
btuD; corrinoid ABC transporter ATPase (EC:3.6.3.34); K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] id=24613566 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Corrinoid ABC transporter ATPase {ECO:0000313|EMBL:ESP89860.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidat
ABC transporter
qh_1_scaffold_6199_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6362..7408
DNA (1047bp) protein (349aa)
trmM; putative methyltransferase (EC:2.1.1.-); K15429 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] id=24613567 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP89861.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qh_1_scaffold_6199_10
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8156..8569)
DNA (414bp) protein (138aa)
PIN domain protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQ99_9EURY
hypothetical protein
PIN domain protein {ECO:0000313|EMBL:ERJ04983.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ33227.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
qh_1_scaffold_6199_11
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8535..8753)
DNA (219bp) protein (73aa)
Transcription regulator CopG-RepA family protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2DG40_9EURY
Transcription regulator CopG-RepA family protein {ECO:0000313|EMBL:ERJ04982.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="H
putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain
qh_1_scaffold_6199_12
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8809..8928)
DNA (120bp) protein (40aa)
malate dehydrogenase (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] id=24653167 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
Malate/lactate dehydrogenase {ECO:0000313|EMBL:ERH13669.1}; Flags: Fragment;; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
Displaying 12 items

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