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qh_2_scaffold_1966

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_1966_1
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2..640)
DNA (639bp) protein (213aa)
Flagellin A1 n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VYJ8_9EURY
flagellin A1
Flagellin {ECO:0000256|RuleBase:RU361282}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
qh_2_scaffold_1966_2
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(653..1399)
DNA (747bp) protein (249aa)
Flagellin A2 n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0IWF3_9EURY
Flagellin {ECO:0000256|RuleBase:RU361282}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 35960.;"
flgA2; flagellin A2
qh_2_scaffold_1966_3
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1736..2029)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JS72_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA10834.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qh_2_scaffold_1966_4
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2228..2563)
DNA (336bp) protein (112aa)
Helix-turn-helix domain protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIX3_9EURY
transcriptional regulator-like protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ERJ05926.1}; Transcriptional regulator-like protein {ECO:0000313|EMBL:CCQ32939.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Haloba
qh_2_scaffold_1966_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2582..3370)
DNA (789bp) protein (263aa)
Circadian regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR61_9EURY
circadian clock protein KaiC
Circadian regulator {ECO:0000313|EMBL:ELZ25750.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
qh_2_scaffold_1966_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3482..3904)
DNA (423bp) protein (141aa)
Chemotaxis protein CheW n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CV25_9EURY
Chemotaxis protein CheW {ECO:0000313|EMBL:ELZ25749.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
CheW protein
qh_2_scaffold_1966_7
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4189..5331
DNA (1143bp) protein (381aa)
response regulator receiver modulated CheB methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=519442 species="Archaea; Euryarchaeota; Halobact
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JR09_HALVA
qh_2_scaffold_1966_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5501..7492
DNA (1992bp) protein (664aa)
Chemotaxis protein CheA n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CTK4_9EURY
Chemotaxis protein CheA {ECO:0000313|EMBL:ELZ25747.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
CheA signal transduction histidine kinase
qh_2_scaffold_1966_9
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7489..8298
DNA (810bp) protein (270aa)
cheR; chemotaxis protein CheR (EC:2.1.1.80)
Chemotaxis protein CheR n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KH10_HALAR
Chemotaxis protein CheR {ECO:0000313|EMBL:EMA20173.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
qh_2_scaffold_1966_10
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8298..9533
DNA (1236bp) protein (412aa)
Phycocyanin alpha phycocyanobilin lyase-like protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KY03_9EURY
Phycocyanin alpha phycocyanobilin lyase-like protein {ECO:0000313|EMBL:EMA25109.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source
cpcE2; phycocyanin alpha phycocyanobilin lyase-like protein
qh_2_scaffold_1966_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10073..10438)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000366C38E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46389.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qh_2_scaffold_1966_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11057..11404
DNA (348bp) protein (116aa)
zinc finger SWIM domain-containing protein id=24644259 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative metal-binding protein {ECO:0000313|EMBL:ERH08491.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
zinc finger SWIM domain-containing protein
qh_2_scaffold_1966_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11437..11982)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00036D70AF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48141.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qh_2_scaffold_1966_14
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(12146..12760)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JH92_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60789.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qh_2_scaffold_1966_15
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(12757..14148)
DNA (1392bp) protein (464aa)
DUF11/DUF58 family protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GSP3_HALVD
hypothetical protein
DUF11/DUF58 family protein {ECO:0000313|EMBL:ADE03028.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY26104.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacace
qh_2_scaffold_1966_16
unknown

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comp(14145..14330)
DNA (186bp) protein (62aa)

This feature has no annotations

Displaying 16 items

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