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qh_3_scaffold_344

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_344_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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400..1551
DNA (1152bp) protein (384aa)
Acetyl-CoA C-acyltransferase 5 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MZZ8_9EURY
Acetyl-CoA C-acyltransferase 5 {ECO:0000313|EMBL:EMA51186.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
acetyl-CoA acetyltransferase
qh_3_scaffold_344_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1887..2324
DNA (438bp) protein (146aa)
Putative extracellular ligand binding protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7P2_9EURY
Putative extracellular ligand binding protein {ECO:0000313|EMBL:EMA53957.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
qh_3_scaffold_344_3
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2324..3169
DNA (846bp) protein (282aa)
Amino acid-binding protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IRQ5_9EURY
Amino acid-binding protein {ECO:0000313|EMBL:ELZ98154.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-151
livK; amino acid-binding protein
qh_3_scaffold_344_4
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3228..3920)
DNA (693bp) protein (231aa)
ABC transporter related n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYU7_HALMD
ABC transporter
ABC transporter {ECO:0000313|EMBL:EMA63793.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
qh_3_scaffold_344_5
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3926..4669)
DNA (744bp) protein (248aa)
ABC transporter n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SW80_NATMM
ABC transporter
ABC transporter {ECO:0000313|EMBL:ELY29846.1}; ABC transporter related protein {ECO:0000313|EMBL:ADD05741.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; N
qh_3_scaffold_344_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4803..5681
DNA (879bp) protein (293aa)
Inner-membrane translocator id=2688265 bin=GWF2_Methylomirabilis_70_14 species=Halalkalicoccus jeotgali genus=Halalkalicoccus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
branched-chain amino acid ABC transporter permease
qh_3_scaffold_344_7
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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5681..6715
DNA (1035bp) protein (345aa)
Inner-membrane translocator n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C8P1_9EURY
Inner-membrane translocator {ECO:0000313|EMBL:ELZ18983.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 1
amino acid/amide ABC transporter membrane protein 2, HAAT family
qh_3_scaffold_344_8
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6733..7854)
DNA (1122bp) protein (374aa)
Aminoglycoside phosphotransferase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WPW9_9EURY
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ELY50393.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius
aminoglycoside phosphotransferase
qh_3_scaffold_344_9
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7851..8363)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WLQ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY50394.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
qh_3_scaffold_344_10
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8396..9724
DNA (1329bp) protein (443aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WMD3_9EURY
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:ELY50391.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Na
acyl-CoA dehydrogenase domain-containing protein
qh_3_scaffold_344_11
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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9875..10867
DNA (993bp) protein (331aa)
Luciferase family protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XT57_9EURY
Luciferase family protein {ECO:0000313|EMBL:ELY64960.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;
putative F420-dependent oxidoreductase, MSMEG_2256 family
qh_3_scaffold_344_12
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11054..12100)
DNA (1047bp) protein (349aa)
N-methyltryptophan oxidase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4H8Y2_9EURY
N-methyltryptophan oxidase {ECO:0000313|EMBL:ESP87175.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Hal
glycine/D-amino acid oxidase, deaminating
qh_3_scaffold_344_13
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(12270..13652)
DNA (1383bp) protein (461aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JL37_NATP1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:AGB31984.1}; Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:ELY78151.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halob
qh_3_scaffold_344_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14215..15066)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCL0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55566.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_3_scaffold_344_15
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15205..16455
DNA (1251bp) protein (417aa)
Sugar transporter n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L3X0_HALJP
sugar transporter
Sugar transporter {ECO:0000313|EMBL:EMA27783.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
qh_3_scaffold_344_16
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16628..17044
DNA (417bp) protein (139aa)
DUF1648 family protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GXD1_HALVD
hypothetical protein
DUF1648 family protein {ECO:0000313|EMBL:ADE04106.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY28022.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae;
qh_3_scaffold_344_17
Haloferax sp. BAB2207, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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17184..17831
DNA (648bp) protein (216aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000313|EMBL:ELK54271.1}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114};; 2-deoxy-D-r
deoC; deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Haloferax sp. BAB2207 RepID=L5NUD2_9EURY
qh_3_scaffold_344_18
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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17831..18856
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JG26_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59769.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
abortive infection protein
qh_3_scaffold_344_19
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19593..20969)
DNA (1377bp) protein (459aa)
Mn2+ and Fe2+ transporter of the NRAMP family-like protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2P1_HALJB
Mn2+ and Fe2+ transporter-like protein
Mn2+ and Fe2+ transporter of the NRAMP family-like protein {ECO:0000313|EMBL:ADJ14998.1}; Mn2+ and Fe2+ transporter-like protein {ECO:0000313|EMBL:ELY34986.1}; TaxID=795797 species="Archaea; Euryarcha
qh_3_scaffold_344_20
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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21148..21546
DNA (399bp) protein (133aa)
PPOX class putative F420-dependent enzyme n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRU0_9EURY
PPOX class putative F420-dependent enzyme {ECO:0000313|EMBL:EFW92709.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladapt
PPOX class F420-dependent enzyme
qh_3_scaffold_344_21
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(21652..22149)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J6H3_HALJB
Uncharacterized protein {ECO:0000313|EMBL:ELY60140.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
qh_3_scaffold_344_22
unknown

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comp(22222..22575)
DNA (354bp) protein (118aa)

This feature has no annotations

qh_3_scaffold_344_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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22675..23937
DNA (1263bp) protein (421aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9U7_9EURY
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:EMA42501.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
miaB; MiaB-like tRNA modifying enzyme
qh_3_scaffold_344_24
unknown

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comp(24869..25006)
DNA (138bp) protein (46aa)

This feature has no annotations

qh_3_scaffold_344_25
uncultured haloarchaeon FLAS10H9, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(24984..25229)
DNA (246bp) protein (82aa)
Putative uncharacterized protein FLAS10H9.32 n=1 Tax=uncultured haloarchaeon FLAS10H9 RepID=A7U0W0_9EURY
Putative uncharacterized protein FLAS10H9.32 {ECO:0000313|EMBL:ABT17391.1}; TaxID=447098 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; environmental samples.;" sour
qh_3_scaffold_344_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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25438..26418
DNA (981bp) protein (327aa)
Formamidase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCL5_9EURY
Formamidase {ECO:0000313|EMBL:EMA55571.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
putative acetamidase/formamidase
qh_3_scaffold_344_27
unknown

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comp(26479..26736)
DNA (258bp) protein (86aa)

This feature has no annotations

qh_3_scaffold_344_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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26935..27078
DNA (144bp) protein (48aa)
tRNA pseudouridine synthase Pus10 {ECO:0000256|HAMAP-Rule:MF_01893}; EC=5.4.99.- {ECO:0000256|HAMAP-Rule:MF_01893};; tRNA pseudouridine 54/55 synthase {ECO:0000256|HAMAP-Rule:MF_01893}; TaxID=797114 s
tRNA pseudouridine synthase Pus10 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2K2_9EURY
hypothetical protein
Displaying 28 items

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