ggKbase home page

qh_3_scaffold_462

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_462_1
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..147
DNA (147bp) protein (49aa)
Transcriptional regulator n=1 Tax=Natronococcus occultus SP4 RepID=L0JW63_9EURY
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGB36319.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
qh_3_scaffold_462_2
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

304..621
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MU29_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA48274.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qh_3_scaffold_462_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(721..1323)
DNA (603bp) protein (201aa)
Probable thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1227455 species="Archaea; Euryarchaeo
tmk; thymidylate kinase (EC:2.7.4.9)
Probable thymidylate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQA7_9EURY
qh_3_scaffold_462_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1548..1976
DNA (429bp) protein (143aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0ND28_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EMA55463.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sali
NAD-dependent epimerase/dehydratase
qh_3_scaffold_462_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1928..2371
DNA (444bp) protein (148aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4Y5_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EMA52982.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thai
NADH dehydrogenase
qh_3_scaffold_462_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2469..3104
DNA (636bp) protein (212aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=122745
phospholactate guanylyltransferase (EC:2.7.7.-)
2-phospho-L-lactate guanylyltransferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N532_9EURY
qh_3_scaffold_462_7
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3662..4855
DNA (1194bp) protein (398aa)
FO synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}; EC=2.5.1.77 {ECO:0000256|HAMAP-Rule:MF_01611};; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}
FO synthase subunit 1 n=1 Tax=Halobacterium sp. DL1 RepID=G4IEX3_9EURY
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit
qh_3_scaffold_462_8
unknown

Not on your lists

4944..5165
DNA (222bp) protein (74aa)

This feature has no annotations

qh_3_scaffold_462_9

Not on your lists

comp(5191..5745)
DNA (555bp) protein (185aa)
Putative membrane-bound metal-dependent hydrolase (DUF457) n=1 Tax=uncultured archaeon A07HB70 RepID=V4XCF7_9ARCH
Putative membrane-bound metal-dependent hydrolase (DUF457) {ECO:0000313|EMBL:ESS05619.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
qh_3_scaffold_462_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5785..7155)
DNA (1371bp) protein (457aa)
FO synthase subunit 2 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N781_9EURY
FO synthase subunit 2 {ECO:0000313|EMBL:EMA52979.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM
FO synthase subunit 2
qh_3_scaffold_462_11
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7264..8298
DNA (1035bp) protein (345aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000313|EMBL:ELZ82749.1}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000313|EMBL:ELZ82749.1};; SAI
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HI27_9EURY
qh_3_scaffold_462_12
unknown

Not on your lists

8394..8555
DNA (162bp) protein (54aa)

This feature has no annotations

qh_3_scaffold_462_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8678..10687)
DNA (2010bp) protein (670aa)
Aldo/keto reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CX55_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:ELZ26997.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
aldo/keto reductase
qh_3_scaffold_462_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11070..11663)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME97_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42740.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_3_scaffold_462_15
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(11672..13561)
DNA (1890bp) protein (630aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycyl-tRNA ligase {ECO:0000313|EMBL:ELY33009.1}; EC=6.1.1.14 {ECO:0000313|EMBL:ELY33009.1};; Glycyl-tRNA synthetase {ECO:0000313|EMBL:ADJ13516.1}; EC=6.1.1.14 {ECO:0000313|EMBL:ADJ13516.1};; TaxID=79
Glycyl-tRNA ligase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4F4_HALJB
qh_3_scaffold_462_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13785..14633)
DNA (849bp) protein (283aa)
putative inosine monophosphate dehydrogenase (EC:1.1.1.205)
Putative inosine monophosphate dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBL2_9EURY
Putative inosine monophosphate dehydrogenase {ECO:0000313|EMBL:EMA42738.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
qh_3_scaffold_462_17
unknown

Not on your lists

comp(15276..15842)
DNA (567bp) protein (189aa)

This feature has no annotations

qh_3_scaffold_462_18
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15937..16692
DNA (756bp) protein (252aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NMN7_HALBP
peptide ABC transporter substrate-binding protein
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:ADQ66192.1}; Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELY27313.1}; Flags: Precursor;; TaxID=4693
qh_3_scaffold_462_19
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16928..17926
DNA (999bp) protein (333aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NMN6_HALBP
dipeptide/oligopeptide/nickel ABC transporter permease
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ADQ66191.1}; Dipeptide/oligopeptide/nickel ABC transporter permease {ECO:0000313|EMBL:ELY27314.1}; TaxID=4
qh_3_scaffold_462_20
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17962..18888
DNA (927bp) protein (309aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NMN5_HALBP
dipeptide/oligopeptide/nickel ABC transporter permease
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ADQ66190.1}; Dipeptide/oligopeptide/nickel ABC transporter permease {ECO:0000313|EMBL:ELY27315.1}; TaxID=4
qh_3_scaffold_462_21
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18974..20233
DNA (1260bp) protein (420aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NMN4_HALBP
oligopeptide/dipeptide ABC transporter ATP-binding protein
Oligopeptide/dipeptide ABC transporter ATPase {ECO:0000313|EMBL:EMA65700.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubru
qh_3_scaffold_462_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20226..21551
DNA (1326bp) protein (442aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N986_9EURY
Oligopeptide/dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA53669.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
oligopeptide/dipeptide ABC transporter ATPase
qh_3_scaffold_462_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21773..22270
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M765_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40220.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
qh_3_scaffold_462_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22525..26325
DNA (3801bp) protein (1267aa)
DNA polymerase II (EC:2.7.7.7)
DNA polymerase II large subunit {ECO:0000255|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000255|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000255|HAMAP-Rule:MF_00324};; TaxID=348780 species="Archaea; Euryar
DNA polymerase II large subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=DP2L_NATPD
qh_3_scaffold_462_25
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26511..28025)
DNA (1515bp) protein (505aa)
Arylsulfatase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXV7_9EURY
Arylsulfatase {ECO:0000313|EMBL:EFW90658.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;
arylsulfatase
qh_3_scaffold_462_26
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28218..29159
DNA (942bp) protein (314aa)
Periplasmic copper-binding protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QT76_9EURY
Periplasmic copper-binding protein {ECO:0000313|EMBL:EFW91805.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pa
qh_3_scaffold_462_27
unknown

Not on your lists

29299..29460
DNA (162bp) protein (54aa)

This feature has no annotations

qh_3_scaffold_462_28
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29956..30585)
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QT77_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91806.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
qh_3_scaffold_462_29
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30537..31034)
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTM2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91951.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
qh_3_scaffold_462_30
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31244..31768
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MA65_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41494.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
Displaying items 1-30 of 34 in total

View Taxonomy