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qh_3_scaffold_576

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_576_1
Plasmodium cynomolgi, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

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1..129
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Plasmodium cynomolgi strain B RepID=K6USE8_9APIC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAB64880.1}; TaxID=1120755 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium).;" source
qh_3_scaffold_576_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(357..602)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N6C9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52250.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_3_scaffold_576_trna_1
unknown

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916..1001
DNA (86bp)
transferRNA
qh_3_scaffold_576_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


1050..1394
DNA (345bp) protein (115aa)
30S ribosomal protein S13 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MSK5_9EURY
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
30S ribosomal protein S13
qh_3_scaffold_576_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


1394..1921
DNA (528bp) protein (176aa)
30S ribosomal protein S4 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP59_9EURY
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
rps4p; 30S ribosomal protein S4P
qh_3_scaffold_576_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1938..2324
DNA (387bp) protein (129aa)
30S ribosomal protein S11 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSE7_9EURY
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauciha
rps11p; 30S ribosomal protein S11P
qh_3_scaffold_576_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2327..3097
DNA (771bp) protein (257aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit D n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQ17_9EURY
DNA-directed RNA polymerase, alpha subunit/40 kD subunit
qh_3_scaffold_576_trna_2
unknown

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3245..3329
DNA (85bp)
transferRNA
qh_3_scaffold_576_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3506..3856
DNA (351bp) protein (117aa)
50S ribosomal protein L18e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4V0_9EURY
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
50S ribosomal protein L18
qh_3_scaffold_576_8
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


3853..4296
DNA (444bp) protein (148aa)
50S ribosomal protein L13 n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L322_9EURY
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;
ribosomal protein L13, archaeal/eukaryotic
qh_3_scaffold_576_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4290..4685
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP64_9EURY
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
rps9p; 30S ribosomal protein S9
qh_3_scaffold_576_10
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4808..5002
DNA (195bp) protein (65aa)
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250, ECO:0000313|EMBL:KDS91409.1}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=2248 species="Archaea; Euryarchaeota; Halobac
DNA-directed RNA polymerase subunit N n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SRX6_9EURY
DNA-directed RNA polymerase subunit N
qh_3_scaffold_576_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5011..5217
DNA (207bp) protein (69aa)
RNA polymerase Rpb6; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] id=24614039 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit K/omega
qh_3_scaffold_576_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5189..6421
DNA (1233bp) protein (411aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRT4_9EURY
qh_3_scaffold_576_13
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


6452..7312
DNA (861bp) protein (287aa)
30S ribosomal protein S2 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6C5_HALXS
30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000256|SAAS:SAAS00012212}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source=
qh_3_scaffold_576_14
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7387..7911)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WVR0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY53525.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
qh_3_scaffold_576_15
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8789..9790
DNA (1002bp) protein (334aa)
Mevalonate kinase {ECO:0000256|HAMAP-Rule:MF_00217}; Short=MK {ECO:0000256|HAMAP-Rule:MF_00217};; Short=MVK {ECO:0000256|HAMAP-Rule:MF_00217};; EC=2.7.1.36 {ECO:0000256|HAMAP-Rule:MF_00217};; TaxID=93
Mevalonate kinase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M7C4_HALMO
mevalonate kinase
qh_3_scaffold_576_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9873..10271
DNA (399bp) protein (133aa)
Isopentenyl phosphate kinase {ECO:0000256|PIRNR:PIRNR016496}; Short=IPK {ECO:0000256|PIRNR:PIRNR016496};; EC=2.7.4.26 {ECO:0000256|PIRNR:PIRNR016496};; TaxID=1132509 species="Archaea; Euryarchaeota; H
Isopentenyl phosphate kinase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LW79_9EURY
aspartate/glutamate/uridylate kinase
Displaying 18 items

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