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qh_6_scaffold_105

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_105_1
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(157..1152)
DNA (996bp) protein (332aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=halophilic archaeon J07HB67 RepID=U1P5W9_9EURY
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ERH12140.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophili
amino acid/amide ABC transporter membrane protein 1, haat family
qh_6_scaffold_105_2
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1149..1859)
DNA (711bp) protein (237aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTK5_HALBP
amino acid/amide ABC transporter ATP-binding protein 2, haat family
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:ADQ67057.1}; Amino acid/amide ABC transporter ATP-binding protein 2, haat family {ECO:0000313|EMBL:ELY29604.1}; Ta
qh_6_scaffold_105_3
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1856..2647)
DNA (792bp) protein (264aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTK4_HALBP
amino acid/amide ABC transporter ATP-binding protein 1, haat family
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ADQ67056.1}; Amino acid/amide ABC transporter ATP-binding protein 1, haat family {ECO:0000313|EMBL:ELY29603.1}; Ta
qh_6_scaffold_105_4
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2648..2794)
DNA (147bp) protein (49aa)
Branched chain amino acid ABC transporter branched chain amino acid-binding protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JX91_9EURY
livK2; branched-chain amino acid ABC transporter amino acid-binding protein
Branched-chain amino acid ABC transporter amino acid-binding protein {ECO:0000313|EMBL:AEM56883.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloa
qh_6_scaffold_105_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2763..3956)
DNA (1194bp) protein (398aa)
Branched chain amino acid ABC transporter branched chain amino acid-binding protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYU5_HALMD
branched chain amino acid ABC transporter branched chain amino acid-binding protein
Branched chain amino acid ABC transporter branched chain amino acid-binding protein {ECO:0000313|EMBL:ACV48634.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Haloba
qh_6_scaffold_105_6
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4083..4787)
DNA (705bp) protein (235aa)
Putative DNA binding protein n=1 Tax=halophilic archaeon J07HB67 RepID=U1PTV0_9EURY
Putative DNA binding protein {ECO:0000313|EMBL:ERH13589.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
DNA-binding protein
qh_6_scaffold_105_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4857..6410)
DNA (1554bp) protein (518aa)
AMP-dependent synthetase and ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLX9_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ELZ24256.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
acyl-CoA synthetase
qh_6_scaffold_105_8
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6403..7206)
DNA (804bp) protein (268aa)
Hydrolase or acyltransferase of alpha/beta superfamily protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTK0_HALBP
hydrolase or acyltransferase of alpha/beta superfamily
Hydrolase or acyltransferase of alpha/beta superfamily protein {ECO:0000313|EMBL:ELY29599.1}; Predicted hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:ADQ67052.1}; TaxID=4693
qh_6_scaffold_105_9
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7322..7492)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A7S0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY93937.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989
hypothetical protein
qh_6_scaffold_105_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7489..7920)
DNA (432bp) protein (144aa)
Metal-sulfur cluster biosynthetic enzyme n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N040_9EURY
Metal-sulfur cluster biosynthetic enzyme {ECO:0000313|EMBL:EMA50918.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
hypothetical protein
qh_6_scaffold_105_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7917..8753)
DNA (837bp) protein (279aa)
Phenylacetate-CoA oxygenase, PaaI subunit n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSI1_9EURY
Phenylacetate-CoA oxygenase, PaaI subunit {ECO:0000313|EMBL:EFW92390.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladapt
phenylacetate-CoA oxygenase subunit PaaI
qh_6_scaffold_105_12
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8746..9075)
DNA (330bp) protein (110aa)
Putative enzyme of phenylacetate metabolism n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NWB5_HALBP
uncharacterized enzyme of phenylacetate metabolism
Putative enzyme of phenylacetate metabolism {ECO:0000313|EMBL:ELY26226.1}; Uncharacterized enzyme of phenylacetate metabolism {ECO:0000313|EMBL:ADQ69335.1}; TaxID=469382 species="Archaea; Euryarchaeot
qh_6_scaffold_105_13
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9075..9380)
DNA (306bp) protein (102aa)
Phenylacetate-CoA oxygenase subunit PaaA n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NWB4_HALBP
hypothetical protein
Phenylacetate-CoA oxygenase subunit PaaA {ECO:0000313|EMBL:ELY26225.1}; Uncharacterized conserved protein {ECO:0000313|EMBL:ADQ69334.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Hal
qh_6_scaffold_105_14
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9995..10621
DNA (627bp) protein (209aa)
Putative DNA binding protein n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IEX3_HALRX
putative DNA binding protein
Putative DNA binding protein {ECO:0000313|EMBL:AGB16522.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18
qh_6_scaffold_105_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10679..14056
DNA (3378bp) protein (1126aa)
Sensor box histidine kinase {ECO:0000313|EMBL:CAI49047.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CAI49047.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Sensor box histidine kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IS41_NATPD
signal-transducing histidine kinase
qh_6_scaffold_105_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14066..14536)
DNA (471bp) protein (157aa)
MaoC domain-containing protein dehydratase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MSW7_9EURY
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:EMA47844.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
acyl dehydratase
qh_6_scaffold_105_17
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14671..15957
DNA (1287bp) protein (429aa)
phenylacetate--CoA ligase (EC:6.2.1.30)
Phenylacetate--CoA ligase {ECO:0000313|EMBL:ADB61766.1}; EC=6.2.1.30 {ECO:0000313|EMBL:ADB61766.1};; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrig
Phenylacetate--CoA ligase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RY20_HALTV
qh_6_scaffold_105_18
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16070..17143)
DNA (1074bp) protein (358aa)
Methionine synthase {ECO:0000256|HAMAP-Rule:MF_00288}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00288};; Homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00288}; TaxID=1210908 species="Archaea;
metE_1; methionine synthase (EC:2.1.1.14)
Probable methylcobalamin:homocysteine methyltransferase n=1 Tax=Halogranum salarium B-1 RepID=J3EW63_9EURY
qh_6_scaffold_105_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17140..18135)
DNA (996bp) protein (332aa)
Cobalamin-independent synthase MetE domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZK6_HALMD
Cobalamin-independent synthase MetE domain-containing protein
Cobalamin-independent synthase MetE domain protein {ECO:0000313|EMBL:ACV48774.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
qh_6_scaffold_105_20
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18180..18779)
DNA (600bp) protein (200aa)
Methylase n=1 Tax=Halobacterium sp. DL1 RepID=G4IBG6_9EURY
Methyltransferase {ECO:0000313|EMBL:AKH98140.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum sulfurir
HemK-related putative methylase
qh_6_scaffold_105_21
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18772..19362)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Halarchaeum acidiphilum RepID=UPI000367DB32
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:GAD51487.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphi
mechanosensitive ion channel protein MscS
qh_6_scaffold_105_22
unknown

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19486..19677
DNA (192bp) protein (64aa)

This feature has no annotations

qh_6_scaffold_105_23

Not on your lists


comp(19892..20728)
DNA (837bp) protein (279aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rul
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=halophilic archaeon DL31 RepID=G2ML66_9ARCH
ribosomal RNA small subunit methyltransferase A
qh_6_scaffold_105_24
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20773..21354)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J300_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15107.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qh_6_scaffold_105_25
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21396..21752)
DNA (357bp) protein (119aa)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:EMA41183.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA41183.1};; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae
DNA-directed RNA polymerase subunit F n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M709_9EURY
RNA polymerase Rpb4
qh_6_scaffold_105_26
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(21757..22047)
DNA (291bp) protein (97aa)
50S ribosomal protein L21e n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KQH8_HALAR
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.
rpl21E; 50S ribosomal protein L21
qh_6_scaffold_105_27
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22148..22414)
DNA (267bp) protein (89aa)
ef1B; elongation factor 1-beta
tef1b; translation elongation factor aEF-1 beta subunit; K03232 elongation factor 1-beta id=24631330 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=122748
qh_6_scaffold_105_28
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22417..22596)
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IBF7_9EURY
RNA-binding protein {ECO:0000313|EMBL:AHG04210.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
qh_6_scaffold_105_29
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22824..23681)
DNA (858bp) protein (286aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GCK6_9EURY
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ELZ69308.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM
hbd4; 3-hydroxyacyl-CoA dehydrogenase
qh_6_scaffold_105_30
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23721..25118)
DNA (1398bp) protein (466aa)
mvaB_1; hydroxymethylglutaryl-CoA synthase 1 (EC:2.3.3.10)
ACP synthase n=1 Tax=Haladaptatus paucihalophilus RepID=UPI00036C5B1C
Uncharacterized protein {ECO:0000313|EMBL:EFW93026.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
Displaying items 1-30 of 104 in total

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