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QH_6_Halobacteriales_65_15

In projects: QH_6  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: QH_6_UNK

Properties

Avg. coverage: 14.83 Longest contig: 111.55 Kbp Bin length: 2.21 Mbp GC content: 64.85 %
Contigs count: 81 Features count: 2629 rRNAs count: 0 tRNAs count: 40

Genome completeness

near complete RP 33 / 55 MC: 3 BSCG 30 / 51 ASCG 37 / 38
Displaying items 1-50 of 81 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_6_scaffold_3861
Genus: Haloarcula (66.67%)
3 3197 bp 67.94 14.36 99.37
qh_6_scaffold_3568
Order: Halobacteriales (50%)
4 3331 bp 64.82 16.93 99.34
qh_6_scaffold_1483
Order: Halobacteriales (50%)
6 5260 bp 66.84 14.60 97.02
qh_6_scaffold_7522
Species: Natronomonas pharaonis (50%)
4 4783 bp 66.88 14.87 96.72
qh_6_scaffold_1423
Order: Halobacteriales (57.14%)
7 5371 bp 67.34 14.24 96.41
qh_6_scaffold_2856
Order: Halobacteriales (60%)
10 6136 bp 63.61 14.41 96.07
qh_6_scaffold_4709
Order: Halobacteriales (50%)
6 3948 bp 67.53 13.20 95.97
qh_6_scaffold_649
Class: Halobacteria (75%)
16 13345 bp 68.15 15.79 95.77
qh_6_scaffold_273
Order: Halobacteriales (80%)
15 13370 bp 65.57 15.47 95.52
qh_6_scaffold_1968
Order: Halobacteriales (57.14%)
7 4536 bp 67.06 15.06 94.84
qh_6_scaffold_356
Order: Halobacteriales (52.17%)
46 38252 bp 66.33 16.19 93.75
qh_6_scaffold_1474
Order: Halobacteriales (52.94%)
17 13596 bp 65.27 14.41 93.58
qh_6_scaffold_149
Order: Halobacteriales (51.35%)
37 32868 bp 65.55 16.87 93.32
qh_6_scaffold_114
Order: Halobacteriales (54.05%)
37 38203 bp 65.56 14.33 93.06
qh_6_scaffold_468
Order: Halobacteriales (52.63%)
19 18783 bp 67.03 15.97 93.04
qh_6_scaffold_445
Order: Halobacteriales (61.9%)
42 36965 bp 67.17 15.46 93.02
qh_6_scaffold_2440
Class: Halobacteria (80%)
5 6188 bp 60.96 14.10 92.89
qh_6_scaffold_159
Order: Halobacteriales (63.64%)
33 31274 bp 65.74 14.63 92.86
qh_6_scaffold_654
Class: Halobacteria (69.23%)
13 8372 bp 66.88 14.27 92.59
qh_6_scaffold_999
Class: Halobacteria (84.21%)
19 14177 bp 64.55 15.34 92.26
qh_6_scaffold_790
Order: Halobacteriales (68%)
25 18833 bp 66.37 14.49 92.18
qh_6_scaffold_115
Order: Halobacteriales (59.09%)
22 20230 bp 63.61 15.00 91.99
qh_6_scaffold_904
Order: Halobacteriales (50%)
12 10744 bp 65.41 15.04 91.87
qh_6_scaffold_524
Order: Halobacteriales (66.67%)
12 11262 bp 67.45 15.41 91.82
qh_6_scaffold_294
Order: Halobacteriales (52.94%)
17 15789 bp 65.50 15.94 91.68
qh_6_scaffold_2558
Class: Halobacteria (90%)
10 5266 bp 67.60 14.39 91.66
qh_6_scaffold_462
Order: Halobacteriales (65.52%)
29 23126 bp 66.31 15.21 91.65
qh_6_scaffold_104
Order: Halobacteriales (56%)
50 43479 bp 66.39 14.02 91.51
qh_6_scaffold_126
Order: Halobacteriales (51.35%)
37 30900 bp 65.19 14.89 91.46
qh_6_scaffold_3987
Class: Halobacteria (60%)
5 4027 bp 66.75 15.17 91.26
qh_6_scaffold_190
Order: Halobacteriales (53.25%)
77 59949 bp 65.18 14.85 91.20
qh_6_scaffold_127
Order: Halobacteriales (70.21%)
47 40660 bp 65.08 15.49 91.03
qh_6_scaffold_34
Class: Halobacteria (70.21%)
141 111548 bp 64.48 14.27 90.82
qh_6_scaffold_1336
Class: Halobacteria (65%)
20 15285 bp 67.16 15.36 90.74
qh_6_scaffold_170
Order: Halobacteriales (54.05%)
37 32029 bp 65.88 15.03 90.69
qh_6_scaffold_333
Class: Halobacteria (67.62%)
105 81309 bp 64.93 14.39 90.47
qh_6_scaffold_454
Order: Halobacteriales (64%)
25 19554 bp 65.50 14.20 90.37
qh_6_scaffold_112
Order: Halobacteriales (62.5%)
80 53407 bp 65.21 15.28 90.26
qh_6_scaffold_113
Class: Halobacteria (82.5%)
80 73722 bp 61.48 13.40 90.16
qh_6_scaffold_843
Class: Halobacteria (89.47%)
38 29501 bp 63.94 14.06 90.02
qh_6_scaffold_387
Order: Halobacteriales (52.78%)
36 24502 bp 65.42 15.93 90.02
qh_6_scaffold_227
Order: Halobacteriales (57.89%)
57 56275 bp 66.25 15.10 89.94
qh_6_scaffold_635
Order: Halobacteriales (58.49%)
53 40896 bp 65.26 14.72 89.89
qh_6_scaffold_281
Order: Halobacteriales (50.75%)
67 54681 bp 66.82 14.46 89.68
qh_6_scaffold_1358
Order: Halobacteriales (62.5%)
8 8587 bp 66.47 14.92 89.58
qh_6_scaffold_886
Class: Halobacteria (76.92%)
13 14097 bp 64.94 13.22 89.51
qh_6_scaffold_1543
Class: Halobacteria (73.33%)
15 11849 bp 63.29 13.38 89.43
qh_6_scaffold_487
Class: Halobacteria (96%)
25 22533 bp 64.61 16.18 89.27
qh_6_scaffold_734
Order: Halobacteriales (51.43%)
35 35309 bp 65.21 14.84 89.25
qh_6_scaffold_105
Order: Halobacteriales (51.92%)
104 81875 bp 66.18 14.76 89.22
Displaying items 1-50 of 81 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.