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qh_6_scaffold_1891

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_1891_1
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..642
DNA (642bp) protein (214aa)
UvrABC system protein B n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NVK1_HALUD
excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
qh_6_scaffold_1891_2
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(639..965)
DNA (327bp) protein (109aa)
Sugar phosphate permease n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DLH9_9EURY
sugar phosphate permease
Sugar phosphate permease {ECO:0000313|EMBL:ADQ66970.1}; Flags: Precursor;; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeo
qh_6_scaffold_1891_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1894..3141
DNA (1248bp) protein (416aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=797114 species="Archaea; Euryarchaeota; Halob
DNA polymerase IV n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CM29_9EURY
DNA polymerase IV
qh_6_scaffold_1891_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3540..4127)
DNA (588bp) protein (196aa)
HhH-GPD family protein; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] id=24615808 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:ESP88232.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatu
DNA N-glycosylase / DNA lyase
qh_6_scaffold_1891_5
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4299..5834
DNA (1536bp) protein (512aa)
MCP domain-containing signal transducer n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K3U4_9EURY
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor {ECO:0000313|EMBL:AKH97168.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halana
htr15; MCP domain-containing signal transducer
qh_6_scaffold_1891_6
unknown

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comp(6084..6527)
DNA (444bp) protein (148aa)

This feature has no annotations

qh_6_scaffold_1891_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6619..7056)
DNA (438bp) protein (146aa)
Transcription elongation factor Spt5 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CVY0_9EURY
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
NusG antitermination factor
qh_6_scaffold_1891_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7056..7229)
DNA (174bp) protein (58aa)
secE; protein translocase subunit SecE id=24644251 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1085028 species="Archaea; Euryarchaeo
secE; preprotein translocase subunit SecE
qh_6_scaffold_1891_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7257..7463)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LW62_9EURY
conserved hypothetical protein (UPF0153)
Uncharacterized protein {ECO:0000313|EMBL:EMA36579.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
qh_6_scaffold_1891_10
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

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comp(7464..7925)
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JG13_9ARCH
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
qh_6_scaffold_1891_11
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8077..8634
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H0E5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ76559.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;
hypothetical protein
qh_6_scaffold_1891_12
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8631..9086
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1N0N8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG96369.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
qh_6_scaffold_1891_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9152..9631
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PGG4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH09481.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_6_scaffold_1891_14
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9628..10149
DNA (522bp) protein (174aa)
Thioredoxin reductase n=2 Tax=Haladaptatus paucihalophilus RepID=E7QWJ6_9EURY
Thioredoxin reductase {ECO:0000313|EMBL:EFW91092.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus
thioredoxin reductase
Displaying 14 items

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