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qh_6_scaffold_2398

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_2398_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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52..1497
DNA (1446bp) protein (482aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
Probable tRNA pseudouridine synthase D n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CCY6_9EURY
qh_6_scaffold_2398_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1549..2166)
DNA (618bp) protein (206aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00587}; EC=2.1.1.257 {ECO:0000256|HAMAP-Rule:MF_00587};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobact
tRNA (pseudouridine(54)-N(1))-methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4F2_9EURY
hypothetical protein
qh_6_scaffold_2398_3
unknown

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2248..2649
DNA (402bp) protein (134aa)

This feature has no annotations

qh_6_scaffold_2398_4
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2642..3124
DNA (483bp) protein (161aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KQ94_HALAR
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA22369.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
membrane protein
qh_6_scaffold_2398_5
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3212..5698
DNA (2487bp) protein (829aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KLX1_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA22367.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
hypothetical protein
qh_6_scaffold_2398_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5802..6800
DNA (999bp) protein (333aa)
GTP-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWK7_9EURY
GTP-binding protein {ECO:0000313|EMBL:ELZ26837.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
GTP-binding protein HSR1-related
qh_6_scaffold_2398_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6821..7555)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUD0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26836.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_6_scaffold_2398_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7600..8847)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUB0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26835.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_6_scaffold_2398_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8983..9375
DNA (393bp) protein (131aa)
Putative heat shock protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWU0_9EURY
Putative heat shock protein {ECO:0000313|EMBL:ELZ27701.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadens
heat shock protein Hsp20
qh_6_scaffold_2398_trna_1
unknown

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comp(9392..9493)
DNA (102bp)
transferRNA
qh_6_scaffold_2398_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9584..11002
DNA (1419bp) protein (473aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
CCA-adding enzyme (EC:2.7.7.72)
CCA-adding enzyme n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0F0_9EURY
qh_6_scaffold_2398_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11087..11410)
DNA (324bp) protein (108aa)
Histone deacetylase superfamily protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWK8_9EURY
Histone deacetylase superfamily protein {ECO:0000313|EMBL:ELZ27616.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
acetoin utilization protein
qh_6_scaffold_2398_12
unknown

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11616..12128
DNA (513bp) protein (171aa)

This feature has no annotations

qh_6_scaffold_2398_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12101..12535)
DNA (435bp) protein (145aa)
Transcription factor CBF/NF-Y/histone domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYW7_9EURY
Transcription factor CBF/NF-Y/histone domain protein {ECO:0000313|EMBL:ELZ27617.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source
transcription factor CBF/NF-Y/histone domain protein
qh_6_scaffold_2398_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12655..13917)
DNA (1263bp) protein (421aa)
Replication factor A n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYC1_9EURY
Replication factor A {ECO:0000313|EMBL:ELZ27618.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1
replication protein A
Displaying 15 items

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