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qh_6_scaffold_660

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_660_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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236..1279
DNA (1044bp) protein (348aa)
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4T2_9EURY
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase {ECO:0000313|EMBL:ELZ29179.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
qh_6_scaffold_660_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1370..1636
DNA (267bp) protein (89aa)
Homolog to antitoxin VapB n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPB5_NATM8
homolog to antitoxin VapB
Homolog to antitoxin VapB {ECO:0000313|EMBL:CCQ35878.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
qh_6_scaffold_660_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1636..2064
DNA (429bp) protein (143aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPH0_NATM8
homolog to endonuclease VapC
qh_6_scaffold_660_4
unknown

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comp(2066..2512)
DNA (447bp) protein (149aa)

This feature has no annotations

qh_6_scaffold_660_trna_1
unknown

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2752..2836
DNA (85bp)
transferRNA
qh_6_scaffold_660_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2902..3309
DNA (408bp) protein (136aa)
30S ribosomal protein S13 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQT0_9EURY
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
rps13p; 30S ribosomal protein S13
qh_6_scaffold_660_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3309..3830
DNA (522bp) protein (174aa)
30S ribosomal protein S4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT56_9EURY
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
rps4p; 30S ribosomal protein S4P
qh_6_scaffold_660_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3827..4216
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSH1_9EURY
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
rps11p; 30S ribosomal protein S11
qh_6_scaffold_660_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4219..5034
DNA (816bp) protein (272aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit D n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUM9_9EURY
RNA polymerase insert
qh_6_scaffold_660_trna_2
unknown

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5230..5314
DNA (85bp)
transferRNA
qh_6_scaffold_660_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5324..5674
DNA (351bp) protein (117aa)
50S ribosomal protein L18e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQR0_9EURY
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.
50S ribosomal protein L18e
qh_6_scaffold_660_10
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5671..6156
DNA (486bp) protein (162aa)
50S ribosomal protein L13 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4J218_9EURY
50S ribosomal protein L13Ae (L13p)
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
qh_6_scaffold_660_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6150..6548
DNA (399bp) protein (133aa)
30S ribosomal protein S9 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT60_9EURY
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
rps9p; 30S ribosomal protein S9
qh_6_scaffold_660_12
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6556..6750
DNA (195bp) protein (65aa)
rpoN; DNA-directed RNA polymerase subunit N (EC:2.7.7.6)
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit N n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSH4_9EURY
qh_6_scaffold_660_13
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6747..6923
DNA (177bp) protein (59aa)
rpoK; DNA-directed RNA polymerase subunit K (EC:2.7.7.6)
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=1227464 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halo
DNA-directed RNA polymerase subunit K n=10 Tax=Haloferax RepID=D4GWX4_HALVD
qh_6_scaffold_660_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6952..8157
DNA (1206bp) protein (402aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQR5_9EURY
enolase
qh_6_scaffold_660_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


8154..8930
DNA (777bp) protein (259aa)
30S ribosomal protein S2 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQT8_9EURY
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000256|SAAS:SAAS00012212}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
30S ribosomal protein S2
qh_6_scaffold_660_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9246..10142
DNA (897bp) protein (299aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT73_9EURY
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:ELZ25597.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosim
electron transfer flavoprotein subunit beta
qh_6_scaffold_660_17
unknown

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comp(10124..11170)
DNA (1047bp) protein (349aa)

This feature has no annotations

qh_6_scaffold_660_18
unknown

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comp(11548..11646)
DNA (99bp) protein (33aa)

This feature has no annotations

qh_6_scaffold_660_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11712..13379
DNA (1668bp) protein (556aa)
FAD dependent oxidoreductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUP5_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:ELZ25599.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
FAD dependent oxidoreductase
qh_6_scaffold_660_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13434..13640
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQS8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25600.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
Displaying 22 items

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