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qh_6_scaffold_4100

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_4100_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..1012
DNA (1011bp) protein (337aa)
SPFH domain, Band 7 family protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1QPR2_9EURY
SPFH domain, Band 7 family protein {ECO:0000313|EMBL:ERH09103.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
ybbK; stomatin/prohibitin-family membrane protease-like protein subunit YbbK
qh_6_scaffold_4100_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1128..1727
DNA (600bp) protein (200aa)
Transcription regulator n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1K4_HALMD
transcriptional regulator
Transcription regulator {ECO:0000313|EMBL:ACV49094.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qh_6_scaffold_4100_3
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1767..2396)
DNA (630bp) protein (210aa)
flgA2; flagellin A2; K07324 archaeal flagellin FlaA id=24613892 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Flagellin {ECO:0000256|RuleBase:RU361282}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyrrelle
archaeal flagellin-like protein
qh_6_scaffold_4100_4
unknown

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comp(2424..2576)
DNA (153bp) protein (51aa)

This feature has no annotations

qh_6_scaffold_4100_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3324..4040)
DNA (717bp) protein (239aa)
hypothetical protein; K06940 id=24644074 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein family (UPF0153) {ECO:0000313|EMBL:ERH08302.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_6_scaffold_4100_6
unknown

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comp(4561..5154)
DNA (594bp) protein (198aa)

This feature has no annotations

qh_6_scaffold_4100_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5251..5784)
DNA (534bp) protein (178aa)
Pre-rRNA processing n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PMX0_9EURY
hypothetical protein
Pre-rRNA processing {ECO:0000313|EMBL:ERJ07677.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ32666.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
qh_6_scaffold_4100_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5784..6728)
DNA (945bp) protein (315aa)
tRNA and rRNA cytosine-C5-methylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR15_9EURY
tRNA and rRNA cytosine-C5-methylase {ECO:0000313|EMBL:ELZ25058.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
RNA methylase
qh_6_scaffold_4100_9
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7046..7306)
DNA (261bp) protein (87aa)
hypothetical protein
ArsR family transcriptional regulator id=24619233 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Transcriptional regulator {ECO:0000313|EMBL:ERH06645.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
qh_6_scaffold_4100_10
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7512..8426
DNA (915bp) protein (305aa)
Proteasome-activating nucleotidase n=3 Tax=Haloarcula RepID=M0JXG7_9EURY
pan2; proteasome-activating nucleotidase
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
Displaying 10 items

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