ggKbase home page

qh_6_scaffold_405

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_405_1
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..916
DNA (915bp) protein (305aa)
Transposase, IS605 OrfB family n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LW91_HALLT
transposase, IS605 OrfB family
Transposase, IS605 OrfB family {ECO:0000313|EMBL:ACM58481.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi
qh_6_scaffold_405_2
unknown

Not on your lists

1024..1206
DNA (183bp) protein (61aa)

This feature has no annotations

qh_6_scaffold_405_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1203..1457)
DNA (255bp) protein (85aa)
arsenite-activated ATPase ArsA (EC:3.6.3.16)
Arsenite-activated ATPase ArsA n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWN4_9EURY
Arsenite-activated ATPase ArsA {ECO:0000313|EMBL:ELZ27605.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
qh_6_scaffold_405_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1408..2118)
DNA (711bp) protein (237aa)
arsenite-activated ATPase ArsA (EC:3.6.3.16)
Arsenite-activated ATPase ArsA {ECO:0000313|EMBL:ACV49075.1}; EC=3.6.3.16 {ECO:0000313|EMBL:ACV49075.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Arsenite-activated ATPase ArsA n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P160_HALMD
qh_6_scaffold_405_5
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2164..2469)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CA23_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20075.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
qh_6_scaffold_405_6
unknown

Not on your lists

comp(2450..2689)
DNA (240bp) protein (80aa)

This feature has no annotations

qh_6_scaffold_405_7
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3170..4447
DNA (1278bp) protein (426aa)
Radical SAM domain protein, CofH subfamily n=1 Tax=halophilic archaeon J07HB67 RepID=U1PQL4_9EURY
Radical SAM domain protein, CofH subfamily {ECO:0000313|EMBL:ERH12414.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
radical SAM protein
qh_6_scaffold_405_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4980..6068)
DNA (1089bp) protein (363aa)
FO synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}; EC=2.5.1.77 {ECO:0000256|HAMAP-Rule:MF_01611};; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}
FO synthase subunit 1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4F5_9EURY
cofG; FO synthase subunit 1
qh_6_scaffold_405_9
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6251..6862)
DNA (612bp) protein (204aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=122745
2-phospho-L-lactate guanylyltransferase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H7T9_9EURY
phospholactate guanylyltransferase
qh_6_scaffold_405_10
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6863..7657)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H5I5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ79811.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;
hypothetical protein
qh_6_scaffold_405_11
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7611..8786)
DNA (1176bp) protein (392aa)
Tubulin/FtsZ GTPase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NN76_HALUD
Tubulin/FtsZ GTPase
Tubulin/FtsZ GTPase {ECO:0000313|EMBL:ACV11476.1}; Flags: Precursor;; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus
qh_6_scaffold_405_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8925..9644)
DNA (720bp) protein (240aa)
ArNOG06768 family NADH-binding domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRE9_NATPD
nolA_1; NADH dehydrogenase 32K chain-like protein
ArNOG06768 family NADH-binding domain protein {ECO:0000313|EMBL:CAI49294.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natr
qh_6_scaffold_405_13
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9737..10324
DNA (588bp) protein (196aa)
Probable thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165, ECO:0000313|EMBL:ELZ79807.1};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1227459
thymidylate kinase (EC:2.7.4.9)
Probable thymidylate kinase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H7T3_9EURY
qh_6_scaffold_405_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10334..10657)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBX2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55467.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_6_scaffold_405_15
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10741..11349
DNA (609bp) protein (203aa)
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Undecaprenyl diphosphate synthase protein {ECO:0000313|EMBL:ERJ06958.1}; EC=2.5.1.31 {ECO:0000313|EMBL:ERJ06958.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halob
Undecaprenyl diphosphate synthase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2E3Y3_9EURY
qh_6_scaffold_405_16
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11425..12453)
DNA (1029bp) protein (343aa)
Restriction endonuclease, type I, EcoRI, R subunit/Type III n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XLC9_9EURY
Restriction endonuclease, type I, EcoRI, R subunit/Type III {ECO:0000313|EMBL:ELY61468.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" so
hypothetical protein
qh_6_scaffold_405_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12503..13327)
DNA (825bp) protein (275aa)
uppS_1; di-trans,poly-cis-decaprenylcistransferase 1; (Z)-prenyl diphosphate synthase 1 (EC:2.5.1.- 2.5.1.31)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synt
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IND7_NATPD
qh_6_scaffold_405_18
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13528..13722
DNA (195bp) protein (65aa)
Cold-shock DNA-binding domain protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IAC3_9EURY
Cold-shock protein {ECO:0000313|EMBL:AHG02797.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
cspD3; cold shock protein
qh_6_scaffold_405_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13883..14290
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IND5_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50368.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qh_6_scaffold_405_20
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14357..15439
DNA (1083bp) protein (361aa)
Heme biosynthesis protein NirGH n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H8L8_9EURY
Heme biosynthesis protein NirGH {ECO:0000313|EMBL:ELZ80820.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC
nirGH; heme biosynthesis protein NirGH
qh_6_scaffold_405_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15436..16080
DNA (645bp) protein (215aa)
Siroheme synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNI1_9EURY
Siroheme synthase {ECO:0000313|EMBL:ELZ24825.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
uroporphyrin-III C-methyltransferase
qh_6_scaffold_405_22
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16146..17426
DNA (1281bp) protein (427aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
Glutamyl-tRNA reductase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3Q4_HALMD
qh_6_scaffold_405_23

Not on your lists

comp(17547..18422)
DNA (876bp) protein (292aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384};; TaxID=14
thrB; homoserine kinase (EC:2.7.1.39)
Homoserine kinase n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y3D5_9ARCH
qh_6_scaffold_405_24
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18526..18882
DNA (357bp) protein (119aa)
Hsp20-type molecular chaperone n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL19_NATM8
hsp20C; Hsp20-type molecular chaperone
Hsp20-type molecular chaperone {ECO:0000313|EMBL:CCQ36920.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
qh_6_scaffold_405_25
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18851..20545
DNA (1695bp) protein (565aa)
Ubiquinone biosynthesis protein UbiB n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISC5_NATPD
ubiB_1; ubiquinone biosynthesis transmembrane protein 1
UbiB family protein {ECO:0000313|EMBL:CAI48962.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qh_6_scaffold_405_26
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20594..21655
DNA (1062bp) protein (354aa)
Class I and II aminotransferase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWB3_9EURY
Class I and II aminotransferase {ECO:0000313|EMBL:EMA36639.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameline
class I and II aminotransferase
qh_6_scaffold_405_27
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


21747..22124
DNA (378bp) protein (126aa)
Translation initiation factor 5A n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQ55_NATM8
tif5A; translation initiation factor aIF-5A
Translation initiation factor 5A {ECO:0000256|HAMAP-Rule:MF_00085, ECO:0000256|SAAS:SAAS00016433}; Hypusine-containing protein {ECO:0000256|HAMAP-Rule:MF_00085}; eIF-5A {ECO:0000256|HAMAP-Rule:MF_0008
qh_6_scaffold_405_28
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22128..22934
DNA (807bp) protein (269aa)
agmatinase (EC:3.5.3.11)
Agmatinase, putative n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQW8_9EURY
Agmatinase, putative {ECO:0000313|EMBL:EFW93382.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus
qh_6_scaffold_405_29
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22986..23684
DNA (699bp) protein (233aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=469382 species="Archaea;
Putative GTP cyclohydrolase 1 type 2 n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NN80_HALBP
hypothetical protein
qh_6_scaffold_405_30
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23679..24326)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P3J3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKF39329.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
Displaying items 1-30 of 52 in total

View Taxonomy