ggKbase home page

qh_6_scaffold_479

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_479_1

Not on your lists

209..724
DNA (516bp) protein (172aa)
Cupin domain protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y6F3_9ARCH
Cupin domain protein {ECO:0000313|EMBL:ESS10438.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
cupin
qh_6_scaffold_479_2

Not on your lists

comp(787..1257)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MNS1_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07049.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_6_scaffold_479_3
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1242..1805)
DNA (564bp) protein (188aa)
Peroxiredoxin n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DCJ9_9EURY
Peroxiredoxin {ECO:0000313|EMBL:ELZ33195.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210.;"
hyrA1; monooxygenase
qh_6_scaffold_479_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1858..2829)
DNA (972bp) protein (324aa)
mvaD; diphosphomevalonate decarboxylase (EC:4.1.1.33)
Phosphomevalonate decarboxylase {ECO:0000313|EMBL:CAI48881.1}; EC=4.1.1.- {ECO:0000313|EMBL:CAI48881.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Diphosphomevalonate decarboxylase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISK5_NATPD
qh_6_scaffold_479_5
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3120..3542
DNA (423bp) protein (141aa)
Cox cluster protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIK3_9EURY
cox cluster protein
Cox cluster protein {ECO:0000313|EMBL:ERJ04598.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4B.;"
qh_6_scaffold_479_6

Not on your lists

3596..3955
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZWX0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS07480.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
cox cluster protein
qh_6_scaffold_479_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4028..5857
DNA (1830bp) protein (610aa)
Cytochrome c oxidase, subunit I n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWS3_HALMD
cytochrome C oxidase subunit I
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:ACV48283.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source
qh_6_scaffold_479_8
unknown

Not on your lists

comp(5868..5963)
DNA (96bp) protein (32aa)

This feature has no annotations

qh_6_scaffold_479_9
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6023..6295
DNA (273bp) protein (91aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5V2N8_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV46214.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qh_6_scaffold_479_10
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7051..7704)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A4P9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60448.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
thioredoxin
qh_6_scaffold_479_11
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7706..8449)
DNA (744bp) protein (248aa)
Putative branched-chain amino acids ABC transporter ATP-binding protein n=3 Tax=Haloferax RepID=L5NW56_9EURY
Putative branched-chain amino acids ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ92234.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halof
livF1; putative branched-chain amino acids ABC transporter ATP-binding protein
qh_6_scaffold_479_12

Not on your lists

comp(8446..9216)
DNA (771bp) protein (257aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y3J8_9ARCH
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ESS05592.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
livG2; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
qh_6_scaffold_479_13

Not on your lists

comp(9209..10450)
DNA (1242bp) protein (414aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=uncultured archaeon A07HR60 RepID=V4YD46_9ARCH
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ESS12973.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
branched-chain amino acid ABC transporter permease
qh_6_scaffold_479_14

Not on your lists

comp(10447..11397)
DNA (951bp) protein (317aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=uncultured archaeon A07HB70 RepID=V4XCD5_9ARCH
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ESS05594.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
livH1; putative branched-chain amino acids ABC transporter permease
qh_6_scaffold_479_15
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11522..12856)
DNA (1335bp) protein (445aa)
Branched-chain amino acid ABC transporter amino acid-binding protein n=2 Tax=Haloarcula RepID=M0JUU8_9EURY
Branched-chain amino acid ABC transporter amino acid-binding protein {ECO:0000313|EMBL:EMA12153.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloa
livK-2; branched-chain amino acid ABC transporter amino acid-binding protein
qh_6_scaffold_479_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12962..14947)
DNA (1986bp) protein (662aa)
Acetyl-CoA synthetase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFP0_9EURY
Acetyl-CoA synthetase {ECO:0000313|EMBL:EMA44193.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DS
AMP-dependent synthetase and ligase
qh_6_scaffold_479_17
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15024..16985)
DNA (1962bp) protein (654aa)
PAS sensor protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BUN6_9EURY
PAS sensor protein {ECO:0000313|EMBL:ELZ14670.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans DSM 11
PAS domain S-box
qh_6_scaffold_479_18
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17099..19012)
DNA (1914bp) protein (638aa)
Acetate/CoA ligase n=2 Tax=Natrinema RepID=I7D0S4_NATSJ
acetate/CoA ligase
Acetate/CoA ligase {ECO:0000313|EMBL:ELY75261.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
qh_6_scaffold_479_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19109..19750
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CEC4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20234.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_6_scaffold_479_20
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19815..20969
DNA (1155bp) protein (385aa)
Stomatin family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK59_NATM8
stomatin family protein
Stomatin family protein {ECO:0000313|EMBL:CCQ35311.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qh_6_scaffold_479_21
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21008..21583
DNA (576bp) protein (192aa)
Uncharacterized conserved protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRD4_HALBP
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ADQ67975.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY24104.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
qh_6_scaffold_479_22
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21694..22008
DNA (315bp) protein (105aa)
hypothetical protein id=24628717 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Uncharacterized protein {ECO:0000313|EMBL:ERG91461.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
qh_6_scaffold_479_23
unknown

Not on your lists

comp(22203..22328)
DNA (126bp) protein (42aa)

This feature has no annotations

qh_6_scaffold_479_24
unknown

Not on your lists

comp(22390..23415)
DNA (1026bp) protein (342aa)

This feature has no annotations

qh_6_scaffold_479_25
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23819..24061)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XYV1_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35313.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qh_6_scaffold_479_26
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24272..25003
DNA (732bp) protein (244aa)
hypothetical protein id=24630490 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Uncharacterized protein {ECO:0000313|EMBL:ERG92780.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
qh_6_scaffold_479_27

Not on your lists

25027..25461
DNA (435bp) protein (145aa)
Acyl-CoA hydrolase n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y0V7_9ARCH
Acyl-CoA hydrolase {ECO:0000313|EMBL:ESS06206.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
thioesterase superfamily protein
qh_6_scaffold_479_28
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25471..25929)
DNA (459bp) protein (153aa)
Uncharacterized protein n=2 Tax=Halorubrum RepID=M0DT06_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ37259.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
qh_6_scaffold_479_29
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26035..26424
DNA (390bp) protein (130aa)
HoxA-like transcriptional regulator n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A9M0_9EURY
HoxA-like transcriptional regulator {ECO:0000313|EMBL:GAD51458.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
qh_6_scaffold_479_30
unknown

Not on your lists

26545..26682
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying items 1-30 of 58 in total

View Taxonomy