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qh_6_scaffold_670

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_670_1
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3..1064
DNA (1062bp) protein (354aa)
Type II secretion system protein E n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PGK1_9EURY
Type II secretion system protein E {ECO:0000313|EMBL:EMA69003.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingens
type II secretion system protein E
qh_6_scaffold_670_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1064..3199
DNA (2136bp) protein (712aa)
Type II secretion system protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QS52_9EURY
Type II secretion system protein {ECO:0000313|EMBL:EFW92821.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauc
hypothetical protein
qh_6_scaffold_670_3

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comp(3215..3718)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JXT3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESS07232.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
qh_6_scaffold_670_4
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3828..4277
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YVW2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY78274.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
qh_6_scaffold_670_5
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4481..5842
DNA (1362bp) protein (454aa)
Phosphomannomutase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CS80_9EURY
Phosphohexomutase (Phosphoglucomutase,phosphomannomutase) {ECO:0000313|EMBL:ELZ86029.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source
phosphomannomutase
qh_6_scaffold_670_6
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6090..7073
DNA (984bp) protein (328aa)
ABC-type transport system, substrate-binding protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EI58_9EURY
ABC-type transport system, substrate-binding protein {ECO:0000313|EMBL:ELZ46763.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Ha
yufN; ABC transporter
qh_6_scaffold_670_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7079..8557
DNA (1479bp) protein (493aa)
rbsA1; ribose ABC transporter ATP-binding protein RbsA (EC:3.6.3.17)
Putative sugar ABC transporter ATP-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CTU7_9EURY
Putative sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ26063.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source=
qh_6_scaffold_670_8
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8564..9877
DNA (1314bp) protein (438aa)
Ribose/branched-chain amino acids ABC transporter permease n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EG74_9EURY
Ribose/branched-chain amino acids ABC transporter permease {ECO:0000313|EMBL:ELZ46765.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sour
ribose ABC transporter permease
qh_6_scaffold_670_9
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9879..10970
DNA (1092bp) protein (364aa)
Ribose ABC transporter permease n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0K663_9EURY
rbsC; ribose ABC transporter permease
Ribose ABC transporter permease {ECO:0000313|EMBL:EMA16872.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californi
qh_6_scaffold_670_10
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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11008..11400
DNA (393bp) protein (131aa)
cdd; cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H1W8_9EURY
Cytidine deaminase {ECO:0000313|EMBL:ELZ77767.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;"
qh_6_scaffold_670_11
unknown

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comp(11401..11793)
DNA (393bp) protein (131aa)

This feature has no annotations

qh_6_scaffold_670_12
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11868..12677
DNA (810bp) protein (270aa)
Uridine phosphorylase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HLC5_9EURY
Uridine phosphorylase {ECO:0000313|EMBL:ESP88729.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonu
purine or other phosphorylase family 1
qh_6_scaffold_670_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13000..14136)
DNA (1137bp) protein (379aa)
ndh; probable NADH dehydrogenase (EC:1.6.99.3)
Probable NADH dehydrogenase {ECO:0000313|EMBL:CCQ36641.1}; EC=1.6.99.3 {ECO:0000313|EMBL:CCQ36641.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Probable NADH dehydrogenase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XR20_NATM8
qh_6_scaffold_670_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14160..14699)
DNA (540bp) protein (180aa)
Transcriptional regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPK4_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ELZ24538.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
hypothetical protein
qh_6_scaffold_670_15
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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14795..15706
DNA (912bp) protein (304aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NUH9_HALBP
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ADQ68699.1}; Flags: Precursor;; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" s
qh_6_scaffold_670_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15816..16715
DNA (900bp) protein (300aa)
Arginase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMR3_9EURY
Arginase {ECO:0000313|EMBL:ELZ24535.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
arginase
qh_6_scaffold_670_17
unknown

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16980..17264
DNA (285bp) protein (95aa)

This feature has no annotations

qh_6_scaffold_670_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(17266..18666)
DNA (1401bp) protein (467aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
DNA gyrase subunit A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPV7_NATPD
gyrA; DNA gyrase subunit A
Displaying 18 items

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