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qh_7_scaffold_3404

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_3404_1
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..1033)
DNA (1032bp) protein (344aa)
Rad24a/uvrB domain-containing protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LR67_HALJP
Rad24a/uvrB domain-containing protein {ECO:0000313|EMBL:EMA34530.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula ja
DEAD/DEAH box helicase
qh_7_scaffold_3404_2
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1124..2305
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K3Z6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA14570.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
qh_7_scaffold_3404_3
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2595..3446
DNA (852bp) protein (284aa)
Initiation factor 2B-like protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KHS6_9EURY
Initiation factor 2B-like protein {ECO:0000313|EMBL:EMA20443.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula califor
translation initiation factor aIF-2B subunit alpha
qh_7_scaffold_3404_4
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3456..4028)
DNA (573bp) protein (191aa)
Type 11 methyltransferase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J8V9_HALVA
Type 11 methyltransferase {ECO:0000313|EMBL:EMA05527.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis AT
hypothetical protein
qh_7_scaffold_3404_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4084..4287
DNA (204bp) protein (68aa)
Zinc/iron permease {ECO:0000313|EMBL:ESP88684.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum t
zinc/iron permease; K07238 zinc transporter, ZIP family id=24614784 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
qh_7_scaffold_3404_6
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4200..4589)
DNA (390bp) protein (130aa)
zinc/iron permease; K07238 zinc transporter, ZIP family id=24614784 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Zinc/iron permease {ECO:0000313|EMBL:ESP88684.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum t
qh_7_scaffold_3404_7
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4873..5535)
DNA (663bp) protein (221aa)
Methyltransferase type 11 n=1 Tax=Halobacterium sp. DL1 RepID=G4IFP7_9EURY
Type 11 methyltransferase {ECO:0000313|EMBL:AHG04582.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;
methylase involved in ubiquinone/menaquinone biosynthesis
qh_7_scaffold_3404_8

Not on your lists

comp(5835..6170)
DNA (336bp) protein (112aa)
Putative membrane protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XBD5_9ARCH
Putative membrane protein {ECO:0000313|EMBL:ESS05189.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
qh_7_scaffold_3404_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6313..6606
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JDI3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57514.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qh_7_scaffold_3404_10
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6619..7278)
DNA (660bp) protein (220aa)
Competence-damage protein CinA-like protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LQ60_HALJP
Competence-damage protein CinA-like protein {ECO:0000313|EMBL:EMA34180.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarc
dip3; competence-damage protein CinA-like protein
qh_7_scaffold_3404_trna_1
unknown

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comp(7400..7470)
DNA (71bp)
transferRNA
qh_7_scaffold_3404_11
unknown

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7472..7807
DNA (336bp) protein (112aa)

This feature has no annotations

qh_7_scaffold_3404_12
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7879..8844)
DNA (966bp) protein (322aa)
guaD3; probable nucleoside deaminase (cytosine/guanine deaminase) (EC:3.5.4.-)
Cytosine deaminase-like metal-dependent hydrolase n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DV24_9EURY
Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:ELZ39356.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halor
qh_7_scaffold_3404_13
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8948..9505
DNA (558bp) protein (186aa)
Acetyltransferase (Isoleucine patch superfamily) n=1 Tax=Natronococcus occultus SP4 RepID=L0K4I5_9EURY
acetyltransferase (isoleucine patch superfamily)
Acetyltransferase (Isoleucine patch superfamily) {ECO:0000313|EMBL:AGB39460.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natron
qh_7_scaffold_3404_14
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10210..10665
DNA (456bp) protein (152aa)
Helicase n=6 Tax=Haloarcula RepID=G0HPV0_HALHT
helicase
Helicase {ECO:0000313|EMBL:EMA16953.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33799.;"
qh_7_scaffold_3404_15
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11119..11418)
DNA (300bp) protein (100aa)
Ribbon-helix-helix protein copG family n=7 Tax=Haloarcula RepID=Q5UYZ2_HALMA
CopG family transcripitonal regulator
CopG family protein {ECO:0000313|EMBL:AEM55670.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain ATC
Displaying 16 items

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