ggKbase home page

qh_9_scaffold_1371

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_1371_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1557..3440
DNA (1884bp) protein (628aa)
Nuclease-like protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D0M5_9EURY
Nuclease-like protein {ECO:0000313|EMBL:ELZ28428.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM
hypothetical protein
qh_9_scaffold_1371_2
unknown

Not on your lists

3547..3693
DNA (147bp) protein (49aa)

This feature has no annotations

qh_9_scaffold_1371_3
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3664..4557)
DNA (894bp) protein (298aa)
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonad
qh_9_scaffold_1371_4

Not on your lists

comp(4576..5043)
DNA (468bp) protein (156aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZT51_9ARCH
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:ESS05940.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
methylase
qh_9_scaffold_1371_5
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5138..5746
DNA (609bp) protein (203aa)
Response regulator receiver protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DZ23_9EURY
Response regulator receiver protein {ECO:0000313|EMBL:ELZ40028.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californ
response regulator with chey-like receiver domain and winged-helix DNA-binding domain
qh_9_scaffold_1371_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5791..6456
DNA (666bp) protein (222aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZT9_HALMD
hisH; imidazole glycerol phosphate synthase subunit HisH
qh_9_scaffold_1371_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6476..6823)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBF4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55191.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
metal-binding protein
qh_9_scaffold_1371_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6962..8077
DNA (1116bp) protein (372aa)
tRNA (guanine(26)-N(2))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00290}; EC=2.1.1.216 {ECO:0000256|HAMAP-Rule:MF_00290};; tRNA 2,2-dimethylguanosine-26 methyltransferase {ECO:0000256|HAMAP-Rule:
N2,N2-dimethylguanosine tRNA methyltransferase (EC:2.1.1.32)
tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC88_9EURY
qh_9_scaffold_1371_9
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8134..9615
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W7P9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN01103.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
qh_9_scaffold_1371_10
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9619..10974)
DNA (1356bp) protein (452aa)
glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;"
Glutamine synthetase n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3ST65_NATMM
qh_9_scaffold_1371_11

Not on your lists

11100..11315
DNA (216bp) protein (72aa)
Transcriptional regulator, AsnC family n=1 Tax=halophilic archaeon DL31 RepID=G2MNH0_9ARCH
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:AEN06799.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_9_scaffold_1371_12
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11294..11482
DNA (189bp) protein (63aa)
AsnC family transcriptional regulator n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LTY3_9EURY
AsnC family transcriptional regulator {ECO:0000313|EMBL:EMA37002.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisal
Transcription regulator AsnC-type-like protein
qh_9_scaffold_1371_13

Not on your lists

comp(11483..11914)
DNA (432bp) protein (144aa)
act1; acyl-CoA thioester hydrolase (EC:3.1.2.-)
Acyl-CoA hydrolase n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZRA6_9ARCH
Acyl-CoA hydrolase {ECO:0000313|EMBL:ESS05265.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
qh_9_scaffold_1371_14
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12208..13830)
DNA (1623bp) protein (541aa)
Thermosome n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D799_HALXS
thermosome
Thermosome {ECO:0000313|EMBL:AEH36667.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18323 / JCM 14
qh_9_scaffold_1371_15
unknown

Not on your lists

comp(14098..14163)
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 15 items

View Taxonomy