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qh_9_scaffold_5010

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_5010_1
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(307..612)
DNA (306bp) protein (102aa)
Non-histone chromosomal MC1 family protein n=2 Tax=Halobacteriaceae RepID=L0JHT7_NATP1
Non-histone chromosomal protein MC1
Non-histone chromosomal MC1 family protein {ECO:0000313|EMBL:ELY69843.1}; Non-histone chromosomal protein MC1 {ECO:0000313|EMBL:AGB30137.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria;
qh_9_scaffold_5010_2
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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626..1828
DNA (1203bp) protein (401aa)
dihydroorotate dehydrogenase 2 (EC:1.3.3.1)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PIG5_9EURY
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:KKF39636.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
qh_9_scaffold_5010_3
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1829..2509)
DNA (681bp) protein (227aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284, ECO:0000313|EMBL:ELZ31073.1};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D8C9_9EURY
Suspect SCG annotation. See neighboring gene [qh_9_scaffold_5010_4].
qh_9_scaffold_5010_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2545..3447)
DNA (903bp) protein (301aa)
pheT; phenylalanine--tRNA ligase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284};
Uncharacterized protein (Fragment) n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SP86_9EURY
qh_9_scaffold_5010_5
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3447..4961)
DNA (1515bp) protein (505aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00282}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00282};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00282}
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Halogranum salarium B-1 RepID=J3JGF7_9EURY
qh_9_scaffold_5010_6

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5159..5512
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZKL7_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESS02910.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
qh_9_scaffold_5010_7
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5525..6205)
DNA (681bp) protein (227aa)
trkA1; trkA domain protein; K03499 trk system potassium uptake protein TrkA id=24627578 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
K+ transport system, NAD-binding component {ECO:0000313|EMBL:ERG90326.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadr
trkA; K+ transport systems, NAD-binding protein
qh_9_scaffold_5010_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6215..7117)
DNA (903bp) protein (301aa)
Amino acid permease-associated region n=1 Tax=Halogranum salarium B-1 RepID=J3JGT2_9EURY
Amino acid permease-associated region {ECO:0000313|EMBL:EJN60366.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
cat2; transport protein (probable substrate cationic amino acids)
qh_9_scaffold_5010_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7616..8305)
DNA (690bp) protein (230aa)
Methyltransferase type 11 n=1 Tax=Halogranum salarium B-1 RepID=J3JGB0_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:EJN59941.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
methylase
qh_9_scaffold_5010_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8604..9188
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M9A4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40975.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qh_9_scaffold_5010_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9213..10013)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBV8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55038.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_9_scaffold_5010_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11027..11365)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITZ6_NATPD
hypothetical protein
Origin-associated protein OapB {ECO:0000313|EMBL:CAI48387.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharao
Displaying 12 items

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