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qs_1_scaffold_4956

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_4956_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..156)
DNA (156bp) protein (52aa)
ABC transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG94_9EURY
ABC transporter {ECO:0000313|EMBL:EMA44752.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350
multidrug ABC transporter ATPase
qs_1_scaffold_4956_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(402..1184)
DNA (783bp) protein (261aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
psmB; proteasome beta subunit (EC:3.4.25.1)
Proteasome subunit beta n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4P9_9EURY
qs_1_scaffold_4956_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1184..1930)
DNA (747bp) protein (249aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
psmA4; proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QYM1_9EURY
qs_1_scaffold_4956_4
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2295..2609
DNA (315bp) protein (105aa)
UV damage endonuclease UvdE n=1 Tax=Halonotius sp. J07HN6 RepID=U1QC90_9EURY
UV damage endonuclease UvdE {ECO:0000313|EMBL:ERH02852.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
UV-endonuclease UvdE
qs_1_scaffold_4956_5

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2614..3126
DNA (513bp) protein (171aa)
uvsE; UV damage endonuclease (EC:3.-.-.-)
UV-damage endonuclease n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y6V2_9ARCH
UV-damage endonuclease {ECO:0000313|EMBL:ESS08491.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
qs_1_scaffold_4956_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3218..4240)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI00_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45331.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_1_scaffold_4956_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4191..5075)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI00_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45331.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_1_scaffold_4956_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5424..5825)
DNA (402bp) protein (134aa)
Zinc finger SWIM domain-containing protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXD9_9EURY
Zinc finger SWIM domain-containing protein {ECO:0000313|EMBL:EMA38111.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
hypothetical protein
qs_1_scaffold_4956_9
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5934..6968)
DNA (1035bp) protein (345aa)
DNA repair and recombination protein RadA n=4 Tax=Halobacterium salinarum RepID=RADA_HALS3
radA; DNA repair and recombination protein RadA
DNA repair and recombination protein RadA; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (strain ATCC 7
qs_1_scaffold_4956_10
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7173..7904
DNA (732bp) protein (244aa)
DNA binding protein putative transcriptional regulator n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MPH1_HALMO
DNA binding protein putative transcriptional regulator {ECO:0000313|EMBL:EMA47526.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sourc
acrR; DNA binding protein putative transcriptional regulator
qs_1_scaffold_4956_11
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7901..8290
DNA (390bp) protein (130aa)
Putative MFS transporter n=3 Tax=Haloferax RepID=M0FG34_9EURY
putative MFS transporter
Putative MFS transporter {ECO:0000313|EMBL:ELZ29790.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
Displaying 11 items

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