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qs_1_scaffold_1012

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1012_1
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3..461)
DNA (459bp) protein (153aa)
UspA domain-containing protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NE36_9EURY
UspA domain protein {ECO:0000313|EMBL:EMA64926.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
UspA domain protein
qs_1_scaffold_1012_2
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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676..2097
DNA (1422bp) protein (474aa)
Sulfatase n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E6N5_9EURY
Sulfatase {ECO:0000313|EMBL:ELZ42723.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 1137.;"
sulfatase
qs_1_scaffold_1012_3
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2112..2597
DNA (486bp) protein (162aa)
Putative membrane protein n=1 Tax=Halonotius sp. J07HN4 RepID=U1QMB3_9EURY
Putative membrane protein {ECO:0000313|EMBL:ERH06712.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
GtrA family protein
qs_1_scaffold_1012_4
unknown

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3135..3272
DNA (138bp) protein (46aa)

This feature has no annotations

qs_1_scaffold_1012_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3281..5479)
DNA (2199bp) protein (733aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKU8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46296.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_1_scaffold_1012_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5732..6487)
DNA (756bp) protein (252aa)
PHP domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITN3_NATPD
hypothetical protein
PHP domain protein {ECO:0000313|EMBL:CAI48500.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qs_1_scaffold_1012_7
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6859..7296)
DNA (438bp) protein (146aa)
Transcription elongation factor Spt5 n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0AAM3_9EURY
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnico
NusG antitermination factor
qs_1_scaffold_1012_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7296..7469)
DNA (174bp) protein (58aa)
Protein translocase subunit SecE n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XYZ8_NATM8
secE; protein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=268739 species="Archaea; Euryarchaeot
qs_1_scaffold_1012_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7583..8743)
DNA (1161bp) protein (387aa)
Cell division protein FtsZ n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITN7_NATPD
ftsZ_1; cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
qs_1_scaffold_1012_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8883..10208)
DNA (1326bp) protein (442aa)
D-aminoacyl-tRNA deacylase {ECO:0000255|HAMAP-Rule:MF_00562}; EC=3.1.1.96 {ECO:0000255|HAMAP-Rule:MF_00562};; D-tyrosyl-tRNA(Tyr) deacylase; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria;
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=DTDA_NATPD
hypothetical protein
qs_1_scaffold_1012_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10350..11144
DNA (795bp) protein (265aa)
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase (NADP(+)) {ECO:0000255|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000255|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000255|HAMAP-Rule:MF_00222};; TaxID=348780 species="Archaea; Euryar
Shikimate dehydrogenase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=AROE_NATPD
qs_1_scaffold_1012_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11198..11752
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAQ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53745.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
aromatic amino acid cluster protein
qs_1_scaffold_1012_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11895..12764
DNA (870bp) protein (290aa)
branched-chain amino acid aminotransferase n=1 Tax=Halomicrobium katesii RepID=UPI000379DA42
class IV aminotransferase
Aminotransferase class IV {ECO:0000313|EMBL:ACV49033.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohatae
qs_1_scaffold_1012_14
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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12971..13276
DNA (306bp) protein (102aa)
Putative pyrophosphatase n=1 Tax=Natronococcus occultus SP4 RepID=L0K190_9EURY
putative pyrophosphatase
Putative pyrophosphatase {ECO:0000313|EMBL:AGB38290.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
qs_1_scaffold_1012_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13440..14309)
DNA (870bp) protein (290aa)
korB1; oxoglutarate--ferredoxin oxidoreductase beta subunit (EC:1.2.7.3)
Oxoglutarate--ferredoxin oxidoreductase beta subunit {ECO:0000313|EMBL:CCQ37617.1}; EC=1.2.7.3 {ECO:0000313|EMBL:CCQ37617.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
Oxoglutarate--ferredoxin oxidoreductase beta subunit n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y505_NATM8
qs_1_scaffold_1012_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14312..16087)
DNA (1776bp) protein (592aa)
korA; oxoglutarate--ferredoxin oxidoreductase, alpha subunit (EC:1.2.7.3)
Oxoglutarate--ferredoxin oxidoreductase alpha subunit {ECO:0000313|EMBL:CAI48707.1}; EC=1.2.7.3 {ECO:0000313|EMBL:CAI48707.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteria
Oxoglutarate--ferredoxin oxidoreductase alpha subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT27_NATPD
qs_1_scaffold_1012_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16266..16913
DNA (648bp) protein (216aa)
FAD-dependent oxidoreductase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLF3_NATM8
FAD-dependent oxidoreductase
FAD-dependent oxidoreductase {ECO:0000313|EMBL:CCQ37615.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapen
qs_1_scaffold_1012_18
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17004..17870
DNA (867bp) protein (289aa)
Transducer HtA protein n=1 Tax=Halobacterium salinarum RepID=P71412_HALSI
htr9; Htr9
Transducer protein Htr9 {ECO:0000313|EMBL:CAP14000.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (
qs_1_scaffold_1012_19
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17851..18327
DNA (477bp) protein (159aa)
Htr-like protein n=2 Tax=Halobacterium salinarum RepID=O51970_HALSA
htlD; Htr-like protein
Htr-like protein {ECO:0000313|EMBL:AAG20731.1}; Uncharacterized protein {ECO:0000313|EMBL:AAC82814.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Hal
qs_1_scaffold_1012_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(18347..18730)
DNA (384bp) protein (128aa)
glo_2; lyase / dioxygenase 2 ( lactoylglutathione lyase, aromatic compounds dioxygenase ) (EC:4.4.1.5 1.13.11.-)
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:CAI48705.1}; EC=5.1.99.1 {ECO:0000313|EMBL:CAI48705.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Methylmalonyl-CoA epimerase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT29_NATPD
qs_1_scaffold_1012_21
unknown

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19252..19599
DNA (348bp) protein (116aa)

This feature has no annotations

qs_1_scaffold_1012_22
unknown

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19628..20701
DNA (1074bp) protein (358aa)

This feature has no annotations

qs_1_scaffold_1012_23
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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20751..21587
DNA (837bp) protein (279aa)
ArsR family transcription regulator n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK90_NATM8
ArsR family transcription regulator
ArsR family transcription regulator {ECO:0000313|EMBL:CCQ35467.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas m
qs_1_scaffold_1012_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(21672..21776)
DNA (105bp) protein (35aa)
mcmA_2; methylmalonyl-CoA mutase, subunit A 2 (EC:5.4.99.2)
Methylmalonyl-CoA mutase subunit A {ECO:0000313|EMBL:CAI48704.2}; EC=5.4.99.2 {ECO:0000313|EMBL:CAI48704.2};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriac
Methylmalonyl-CoA mutase subunit A n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y179_NATM8
Displaying 24 items

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