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qs_1_scaffold_1276

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1276_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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49..387
DNA (339bp) protein (113aa)
Inner-membrane translocator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MUC1_9EURY
Inner-membrane translocator {ECO:0000313|EMBL:EMA55903.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
branched-chain amino acid ABC transporter permease
qs_1_scaffold_1276_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(527..1582)
DNA (1056bp) protein (352aa)
Fe2+ transport protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DLQ3_9EURY
Fe2+ transport protein {ECO:0000313|EMBL:ELZ35064.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JC
fe2+ transport protein
qs_1_scaffold_1276_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1669..2106
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JH87_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60771.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
halocyanin domain protein
qs_1_scaffold_1276_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2196..3455
DNA (1260bp) protein (420aa)
Plastocyanin n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4H7_9EURY
Plastocyanin {ECO:0000313|EMBL:EMA51580.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
petE; plastocyanin
qs_1_scaffold_1276_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3458..3901
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MJ35_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA45686.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
qs_1_scaffold_1276_6
Yersinia intermedia, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3904..4992
DNA (1089bp) protein (363aa)
Rhs element Vgr family protein {ECO:0000313|EMBL:AJJ19302.1}; TaxID=631 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia inte
Rhs element Vgr family protein
qs_1_scaffold_1276_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5154..6695)
DNA (1542bp) protein (514aa)
SagB-type dehydrogenase domain protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEA4_9EURY
SagB-type dehydrogenase domain protein {ECO:0000313|EMBL:EMA55419.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus s
SagB-type dehydrogenase domain
qs_1_scaffold_1276_8
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6923..7678
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LL37_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA33144.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qs_1_scaffold_1276_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7745..9187)
DNA (1443bp) protein (481aa)
thiN1; HTH domain protein / thiamine-phosphate synthase (EC:2.5.1.3)
HTH domain protein / thiamine-phosphate synthase {ECO:0000313|EMBL:CCQ37992.1}; EC=2.5.1.3 {ECO:0000313|EMBL:CCQ37992.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
HTH domain protein / thiamine-phosphate synthase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTX0_NATM8
qs_1_scaffold_1276_10
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9184..11226)
DNA (2043bp) protein (681aa)
Deoxycytidine triphosphate deaminase n=1 Tax=Natronococcus occultus SP4 RepID=L0JX05_9EURY
Deoxycytidine triphosphate deaminase {ECO:0000313|EMBL:AGB36383.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occu
deoxycytidine triphosphate deaminase
qs_1_scaffold_1276_11
unknown

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comp(11274..11876)
DNA (603bp) protein (201aa)

This feature has no annotations

qs_1_scaffold_1276_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11969..12307
DNA (339bp) protein (113aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:CAI50703.2}; EC=3.1.1.29 {ECO:0000313|EMBL:CAI50703.2};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
Peptidyl-tRNA hydrolase n=2 Tax=Natronomonas pharaonis RepID=Q3IMF5_NATPD
qs_1_scaffold_1276_13
unknown

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12724..12864
DNA (141bp) protein (47aa)

This feature has no annotations

qs_1_scaffold_1276_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12944..14302
DNA (1359bp) protein (453aa)
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
Probable tRNA pseudouridine synthase D {ECO:0000255|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000255|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000255|HAMAP-Rule:MF_01082}; tRNA pseud
Probable tRNA pseudouridine synthase D n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=TRUD_NATPD
qs_1_scaffold_1276_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14359..15084
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKK8_NATM8
hypothetical protein
DUF2103 family protein {ECO:0000313|EMBL:CCQ36078.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (s
qs_1_scaffold_1276_16
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15138..15455)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W075_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY42899.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
hypothetical protein
qs_1_scaffold_1276_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15550..15819
DNA (270bp) protein (90aa)
50S ribosomal protein L43e n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPS2_NATM8
rpl43e; 50S ribosomal protein L43e
50S ribosomal protein L43e {ECO:0000313|EMBL:CCQ36077.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensi
qs_1_scaffold_1276_18
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15816..15950
DNA (135bp) protein (45aa)
DNA-directed RNA polymerase subunit P {ECO:0000256|HAMAP-Rule:MF_00615}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00615};; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit P n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQA8_HALUD
DNA-directed RNA polymerase subunit P
qs_1_scaffold_1276_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15969..16253
DNA (285bp) protein (95aa)
KEOPS complex subunit Pcc1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IME9_NATPD
rpo operon protein
KEOPS complex subunit Pcc1 {ECO:0000313|EMBL:CAI50709.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis
qs_1_scaffold_1276_20
unknown

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16317..16481
DNA (165bp) protein (55aa)

This feature has no annotations

qs_1_scaffold_1276_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(16616..18478)
DNA (1863bp) protein (621aa)
Glycosyltransferase AglD {ECO:0000313|EMBL:CAI49213.1}; EC=2.4.-.- {ECO:0000313|EMBL:CAI49213.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
Glycosyltransferase AglD n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRN0_NATPD
glycosyltransferase
qs_1_scaffold_1276_22
unknown

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comp(18420..19673)
DNA (1254bp) protein (418aa)

This feature has no annotations

qs_1_scaffold_1276_23
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19711..20334
DNA (624bp) protein (208aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halof
zim; CTAG modification methylase (EC:2.1.1.113)
CTAG modification methylase / site-specific DNA-methyltransferase (Cytosine-N4-specific) n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GQ45_9EURY
qs_1_scaffold_1276_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20356..21030
DNA (675bp) protein (225aa)
aroD; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HA
3-dehydroquinate dehydratase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRN2_NATPD
qs_1_scaffold_1276_25
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21299..21676
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NTN9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA60594.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
qs_1_scaffold_1276_26
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21706..22953
DNA (1248bp) protein (416aa)
Sodium/hydrogen exchanger n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DBI3_HALXS
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:AEH37102.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM
qs_1_scaffold_1276_27
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23010..24176)
DNA (1167bp) protein (389aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000255|HAMAP-Rule:MF_01244}; Short=DHQ synthase {ECO:0000255|HAMAP-Rule:MF_01244};; EC=1.4.1.24 {ECO:0000255|HAMAP-Rule:MF_01244};; 3-dehydroquinate synthase II {ECO:00
3-dehydroquinate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=DHQS_NATPD
qs_1_scaffold_1276_28
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(24239..25063)
DNA (825bp) protein (275aa)
fba_2; fructose-bisphosphate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQC5_NATPD
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase {ECO:0000256|HAMAP-Rule:MF_00960}; Short=ADH synthase {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADHS {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADT
qs_1_scaffold_1276_29
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(25060..25791)
DNA (732bp) protein (244aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000255|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000255|HAMAP-Rule:MF_00131};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
Tryptophan synthase alpha chain n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=TRPA_NATPD
Displaying 29 items

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