ggKbase home page

qs_1_scaffold_510

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_510_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..469
DNA (468bp) protein (156aa)
DNA polymerase sliding clamp n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PCNA_NATPD
pcn; DNA polymerase sliding clamp
DNA polymerase sliding clamp {ECO:0000255|HAMAP-Rule:MF_00317}; Proliferating cell nuclear antigen homolog {ECO:0000255|HAMAP-Rule:MF_00317}; Short=PCNA {ECO:0000255|HAMAP-Rule:MF_00317};; TaxID=34878
qs_1_scaffold_510_2
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

480..1238
DNA (759bp) protein (253aa)
hypothetical protein id=24634594 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
Zinc finger, C2H2 type, DNA endonuclease family protein {ECO:0000313|EMBL:ERG97397.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" sour
qs_1_scaffold_510_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1518..2105)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1D2_HALMD
Uncharacterized protein {ECO:0000313|EMBL:ACV47140.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
CHP00725 family protein
qs_1_scaffold_510_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2287..2415)
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITT0_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48453.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_1_scaffold_510_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2494..3264)
DNA (771bp) protein (257aa)
PHP domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKA5_NATM8
PHP domain protein
PHP domain protein {ECO:0000313|EMBL:CCQ35544.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strai
qs_1_scaffold_510_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3605..3895
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITT2_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48451.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_1_scaffold_510_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3947..5353)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITT3_NATPD
hypothetical protein rbh
DUF4393 domain protein {ECO:0000313|EMBL:CAI48450.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (str
qs_1_scaffold_510_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5350..6297)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITT4_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48449.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_1_scaffold_510_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6900..7574
DNA (675bp) protein (225aa)
ArCOG06342 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITT5_NATPD
transducer protein
ArCOG06342 family protein {ECO:0000313|EMBL:CAI48448.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (
qs_1_scaffold_510_10
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7680..8030)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SUT3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY92853.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989
hypothetical protein
qs_1_scaffold_510_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(8193..10976)
DNA (2784bp) protein (928aa)
alaS; alanine--tRNA ligase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
Alanine--tRNA ligase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y551_NATM8
qs_1_scaffold_510_12
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11437..14259
DNA (2823bp) protein (941aa)
Hef nuclease n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VV00_9EURY
Hef nuclease
Hef nuclease {ECO:0000313|EMBL:AGN01070.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
qs_1_scaffold_510_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14326..15465)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC90_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43361.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
beta-lactamase
qs_1_scaffold_510_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15563..16219
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC66_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43362.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
transcription anti-termination factor
qs_1_scaffold_510_15
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16340..16861
DNA (522bp) protein (174aa)
Transcriptional regulator, TrmB n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NT29_HALUD
transcriptional regulator, TrmB
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ACV12104.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahens
qs_1_scaffold_510_16
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17017..17490)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L916_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA28974.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qs_1_scaffold_510_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17649..18506)
DNA (858bp) protein (286aa)
UPF0148 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNR0_NATM8
UPF0148 family protein
UPF0148 family protein {ECO:0000313|EMBL:CCQ35586.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (s
qs_1_scaffold_510_18
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18630..19112)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HJ27_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESP87919.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
qs_1_scaffold_510_19
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19204..19887
DNA (684bp) protein (228aa)
probable S-adenosylmethionine-dependent methyltransferase (homolog to 24-sterol C-methyltransferase) (EC:2.1.1.-)
Probable S-adenosylmethionine-dependent methyltransferase (Homolog to 24-sterol C-methyltransferase) {ECO:0000313|EMBL:CCQ35737.1}; EC=2.1.1.- {ECO:0000313|EMBL:CCQ35737.1};; TaxID=268739 species="Arc
Probable S-adenosylmethionine-dependent methyltransferase (Homolog to 24-sterol C-methyltransferase) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP07_NATM8
qs_1_scaffold_510_20
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19903..20247)
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Archaea RepID=U1NZK2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERH02974.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
qs_1_scaffold_510_21
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20222..20542)
DNA (321bp) protein (107aa)
hypothetical protein id=24620352 bin=Halonotius_J07HN6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halonotius_J07HN6
Uncharacterized protein {ECO:0000313|EMBL:ERH02973.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
hypothetical protein
qs_1_scaffold_510_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20640..21263)
DNA (624bp) protein (208aa)
DUF1684 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITG3_NATPD
hypothetical protein
DUF1684 family protein {ECO:0000313|EMBL:CAI48570.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (str
qs_1_scaffold_510_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21374..23740
DNA (2367bp) protein (789aa)
DNA repair helicase Rad3 {ECO:0000313|EMBL:CAI48571.2}; EC=3.6.4.12 {ECO:0000313|EMBL:CAI48571.2};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natro
DNA repair helicase Rad3 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITG2_NATPD
rad3a; DNA repair helicase
qs_1_scaffold_510_24
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25131..26750)
DNA (1620bp) protein (540aa)
Gamma-glutamyltransferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CYX1_9EURY
Gamma-glutamyltransferase {ECO:0000313|EMBL:ELZ28431.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
gamma-glutamyltransferase 2
qs_1_scaffold_510_25
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27081..27329
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QW89_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91223.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_1_scaffold_510_26
unknown

Not on your lists

27326..27553
DNA (228bp) protein (76aa)

This feature has no annotations

qs_1_scaffold_510_27
unknown

Not on your lists

27609..28382
DNA (774bp) protein (258aa)

This feature has no annotations

qs_1_scaffold_510_28
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28577..29713
DNA (1137bp) protein (379aa)
NMD3 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK74_NATM8
NMD3 family protein
NMD3 family protein {ECO:0000313|EMBL:CCQ35387.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (stra
qs_1_scaffold_510_29
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29719..30117
DNA (399bp) protein (133aa)
tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase {ECO:0000256|HAMAP-Rule:MF_01922}; EC=2.5.1.114 {ECO:0000256|HAMAP-Rule:MF_01922};; tRNA wyosine derivatives biosynthesis protein T
tRNA-(4-demethylwyosine) alpha-amino-alpha-carboxypropyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISW4_NATPD
hypothetical protein
qs_1_scaffold_510_30
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30268..30768
DNA (501bp) protein (167aa)
tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase {ECO:0000256|HAMAP-Rule:MF_01922}; EC=2.5.1.114 {ECO:0000256|HAMAP-Rule:MF_01922};; tRNA wyosine derivatives biosynthesis protein T
tRNA-(4-demethylwyosine) alpha-amino-alpha-carboxypropyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISW4_NATPD
hypothetical protein
Displaying items 1-30 of 34 in total

View Taxonomy