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qs_4_scaffold_420

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_420_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..214)
DNA (213bp) protein (71aa)
Conserved hypothetical membrane protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIN5_9EURY
Conserved hypothetical membrane protein {ECO:0000313|EMBL:CCQ34769.1}; Integral membrane sensor signal transduction histidine kinase protein {ECO:0000313|EMBL:ERJ06998.1}; TaxID=1033806 species="Archa
hypothetical protein
qs_4_scaffold_420_2
unknown

Not on your lists

332..427
DNA (96bp) protein (32aa)

This feature has no annotations

qs_4_scaffold_420_3
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

470..1981
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NXE2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA62481.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
hypothetical protein
qs_4_scaffold_420_4
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1986..2315)
DNA (330bp) protein (110aa)
UPF0145 protein Halxa_0718 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6B1_HALXS
hypothetical protein
UPF0145 protein Halxa_0718 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strai
qs_4_scaffold_420_5
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2421..3317)
DNA (897bp) protein (299aa)
MaoC family protein n=2 Tax=Haloarcula hispanica RepID=G0HT12_HALHT
acyl dehydratase
Acyl dehydratase {ECO:0000313|EMBL:AHB64844.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
qs_4_scaffold_420_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3528..6425
DNA (2898bp) protein (966aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=24644152 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
ATP dependent helicase, Lhr family {ECO:0000313|EMBL:ERH08384.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
DEAD/DEAH box helicase
qs_4_scaffold_420_7
unknown

Not on your lists

6543..7019
DNA (477bp) protein (159aa)

This feature has no annotations

qs_4_scaffold_420_8
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7029..8075
DNA (1047bp) protein (349aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_0032
ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPI3_9EURY
qs_4_scaffold_420_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8085..9488
DNA (1404bp) protein (468aa)
protoporphyrinogen oxidase (EC:1.3.3.4)
Protoporphyrinogen oxidase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPI2_9EURY
Protoporphyrinogen oxidase {ECO:0000313|EMBL:EFW93465.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalop
qs_4_scaffold_420_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9556..10899)
DNA (1344bp) protein (448aa)
Cytochrome P450 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CDY9_9EURY
Cytochrome P450 {ECO:0000313|EMBL:ELZ20567.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
cytochrome P450
qs_4_scaffold_420_11
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11220..11618
DNA (399bp) protein (133aa)
imd1; inosine monophosphate dehydrogenase (EC:1.1.1.205)
Inosine monophosphate dehydrogenase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LBE5_HALJP
Inosine monophosphate dehydrogenase {ECO:0000313|EMBL:EMA29754.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japo
qs_4_scaffold_420_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11777..12787)
DNA (1011bp) protein (337aa)
uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] id=24644729 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uroporphyrinogen decarboxylase {ECO:0000256|RuleBase:RU000554}; EC=4.1.1.37 {ECO:0000256|RuleBase:RU000554};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="ha
uroporphyrinogen decarboxylase (EC:4.1.1.37)
qs_4_scaffold_420_13
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12901..13554
DNA (654bp) protein (218aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L8D8_HALJP
adenylate kinase
qs_4_scaffold_420_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13634..14524
DNA (891bp) protein (297aa)
HtlB n=1 Tax=Halomicrobium katesii RepID=UPI00036DDFB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47849.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_420_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14596..15177
DNA (582bp) protein (194aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS0005
cmk2; cytidylate kinase (EC:2.7.4.25)
Cytidylate kinase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PHQ8_9EURY
qs_4_scaffold_420_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15185..16150
DNA (966bp) protein (322aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
rRNA pseudouridine synthase, putative id=24648808 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
rRNA pseudouridine synthase, putative
qs_4_scaffold_420_17
unknown

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16319..16945
DNA (627bp) protein (209aa)

This feature has no annotations

qs_4_scaffold_420_trna_1
unknown

Not on your lists

17045..17115
DNA (71bp)
transferRNA
qs_4_scaffold_420_18
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17139..19541)
DNA (2403bp) protein (801aa)
Zinc-transporting ATPase n=1 Tax=Halogranum salarium B-1 RepID=J3JCX4_9EURY
Zinc-transporting ATPase {ECO:0000313|EMBL:EJN56989.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
zinc-transporting ATPase
qs_4_scaffold_420_19
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19665..20846)
DNA (1182bp) protein (394aa)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LAF2_HALJP
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:EMA30546.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcul
rffH1; glucose-1-phosphate thymidylyltransferase
qs_4_scaffold_420_20
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20965..22236
DNA (1272bp) protein (424aa)
Putative phosphate-binding enzyme n=1 Tax=halophilic archaeon J07HX5 RepID=U1MH94_9EURY
Putative phosphate-binding enzyme {ECO:0000313|EMBL:ERG88674.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
PcrB family protein
qs_4_scaffold_420_21
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22341..24083)
DNA (1743bp) protein (581aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012};; TaxID=634497 species="Archaea; Euryarchaeota;
Dihydroxy-acid dehydratase n=2 Tax=Haloarcula hispanica RepID=G0HX49_HALHT
qs_4_scaffold_420_22
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24192..25547
DNA (1356bp) protein (452aa)
FAD dependent oxidoreductase; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] id=24644430 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Dehydrogenases (Flavoprotein) {ECO:0000313|EMBL:ERH08652.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
FAD dependent oxidoreductase
qs_4_scaffold_420_23
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25606..27396
DNA (1791bp) protein (597aa)
Pyrrolo-quinoline quinone n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AEG3_NATGS
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ELY66752.1}; WD40-like repeat protein {ECO:0000313|EMBL:AFZ71450.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae
PQQ repeat protein
qs_4_scaffold_420_trna_2
unknown

Not on your lists

comp(27523..27597)
DNA (75bp)
transferRNA
Displaying 25 items

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