ggKbase home page

qs_4_scaffold_662

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_662_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..564
DNA (564bp) protein (188aa)
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase, alpha chain {ECO:0000313|EMBL:ACV49437.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ACV49437.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
Ribonucleoside-diphosphate reductase, alpha chain n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P542_HALMD
qs_4_scaffold_662_2
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(937..1320)
DNA (384bp) protein (128aa)
Probable glycine cleavage system H protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W994_9EURY
Probable glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natrono
gcvH; glycine cleavage system H protein
qs_4_scaffold_662_3
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1317..2390)
DNA (1074bp) protein (358aa)
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10)
Probable aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=662475 spe
Probable aminomethyltransferase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JMV4_9EURY
qs_4_scaffold_662_4
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2518..3687)
DNA (1170bp) protein (390aa)
Molecular chaperone GroES n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y1B1_9EURY
Molecular chaperone GroES {ECO:0000313|EMBL:ELY67830.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;
alcohol dehydrogenase GroES domain protein
qs_4_scaffold_662_5
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3707..4660)
DNA (954bp) protein (318aa)
Putative integral membrane protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JG00_NATP1
putative integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:AGB30234.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY78739.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natri
qs_4_scaffold_662_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4687..5628
DNA (942bp) protein (314aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWI1_9EURY
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EMA49946.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
qs_4_scaffold_662_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5657..6367)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NVQ1_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46166.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_662_8
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6541..7500
DNA (960bp) protein (320aa)
Aminopeptidase n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V062_HALMA
pepB1; aminopeptidase
Aminopeptidase {ECO:0000313|EMBL:AAV47091.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (strain ATCC 4
qs_4_scaffold_662_9
unknown

Not on your lists

comp(7513..7794)
DNA (282bp) protein (94aa)

This feature has no annotations

qs_4_scaffold_662_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7961..8338)
DNA (378bp) protein (126aa)
Endoribonuclease L-PSP n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0I4_HALMD
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACV46966.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomic
qs_4_scaffold_662_11

Not on your lists

8527..9681
DNA (1155bp) protein (385aa)
Arabinose efflux permease n=1 Tax=uncultured archaeon A07HR60 RepID=V4YFR3_9ARCH
Arabinose efflux permease {ECO:0000313|EMBL:ESS11956.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
tp19; major facilitator transporter
qs_4_scaffold_662_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9821..10270
DNA (450bp) protein (150aa)
deoxyribonuclease n=1 Tax=Halomicrobium katesii RepID=UPI00037932C0
deoxyribonuclease/rho motif-related TRAM
Deoxyribonuclease/rho motif-related TRAM {ECO:0000313|EMBL:ACV47148.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicr
qs_4_scaffold_662_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10364..11089)
DNA (726bp) protein (242aa)
Putative acetyltransferase n=1 Tax=halophilic archaeon J07HX64 RepID=U1P087_9EURY
Putative acetyltransferase {ECO:0000313|EMBL:ERH09960.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
argA2; acetyltransferase
qs_4_scaffold_662_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11372..12043
DNA (672bp) protein (224aa)
HD family hydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISH7_NATPD
hypothetical protein
HD family hydrolase {ECO:0000313|EMBL:CAI48909.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qs_4_scaffold_662_15
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12044..12724)
DNA (681bp) protein (227aa)
Lysine exporter (LYSE/YGGA) n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NS90_9EURY
Lysine exporter (LYSE/YGGA) {ECO:0000313|EMBL:EMA60631.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 1497
lysine exporter (LYSE/YGGA)
qs_4_scaffold_662_16
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12791..13066)
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HQ85_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM55684.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
qs_4_scaffold_662_17
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13082..20044)
DNA (6963bp) protein (2321aa)
MCM family protein n=1 Tax=Halarchaeum acidiphilum RepID=UPI00035E5580
Replicative DNA helicase / cell division control protein 21 /MCM {ECO:0000313|EMBL:EMA43956.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcu
XRE family transcriptional regulator
qs_4_scaffold_662_18
unknown

Not on your lists

comp(20074..20229)
DNA (156bp) protein (52aa)

This feature has no annotations

Displaying 18 items

View Taxonomy