ggKbase home page

qs_8_scaffold_187

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_187_1
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..573
DNA (573bp) protein (191aa)
Transposase ISH5 n=1 Tax=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) RepID=B0R8M6_HALS3
transposase (ISH5)
ISH8-type transposase ISH5 {ECO:0000313|EMBL:CAP15056.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinaru
qs_8_scaffold_187_2
unknown

Not on your lists

comp(767..946)
DNA (180bp) protein (60aa)

This feature has no annotations

qs_8_scaffold_187_3
unknown

Not on your lists

comp(986..1891)
DNA (906bp) protein (302aa)

This feature has no annotations

qs_8_scaffold_187_4
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2059..3489
DNA (1431bp) protein (477aa)
Dihydroorotase, multifunctional complex type n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZIS8_9EURY
Dihydroorotase {ECO:0000313|EMBL:KDE58595.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
dihydroorotase
qs_8_scaffold_187_5
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

3851..5080
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-C22 RepID=UPI0003824C35
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
qs_8_scaffold_187_6
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5123..6148)
DNA (1026bp) protein (342aa)
aldolase n=1 Tax=Sciscionella marina RepID=UPI00037C44D0
Uncharacterized protein {ECO:0000313|EMBL:KDE57491.1}; Flags: Fragment;; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnic
putative aldolase
qs_8_scaffold_187_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6648..7796)
DNA (1149bp) protein (383aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZ43_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90204.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_8_scaffold_187_8
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7940..9442
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B7P2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ06502.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
qs_8_scaffold_187_9
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9483..10013)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RW03_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB61432.1}; Flags: Precursor;; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigen
qs_8_scaffold_187_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10346..11341)
DNA (996bp) protein (332aa)
Luciferase-like, subgroup n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4U6_CONWI
luciferase-like protein
Luciferase-like, subgroup {ECO:0000313|EMBL:ADB52553.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter w
qs_8_scaffold_187_11
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11758..12825
DNA (1068bp) protein (356aa)
dihydroorotate dehydrogenase (EC:1.3.98.1)
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:AEH37646.1}; EC=1.3.98.1 {ECO:0000313|EMBL:AEH37646.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopig
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D5E1_HALXS
qs_8_scaffold_187_12
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12842..13507)
DNA (666bp) protein (222aa)
O-methyltransferase family 3 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QV02_9EURY
O-methyltransferase family 3 {ECO:0000313|EMBL:EFW91520.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihal
putative O-methyltransferase
qs_8_scaffold_187_13
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13626..13895
DNA (270bp) protein (90aa)
AbrB family transcription regulator n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DYH4_9EURY
AbrB family transcription regulator {ECO:0000313|EMBL:ELZ40585.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californ
AbrB family transcription regulator
qs_8_scaffold_187_14
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13892..14299
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Halorubrum RepID=M0DGC6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA61271.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;
hypothetical protein
qs_8_scaffold_187_15
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14351..15226)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L531_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA27085.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qs_8_scaffold_187_16
unknown

Not on your lists

comp(15290..15601)
DNA (312bp) protein (104aa)

This feature has no annotations

qs_8_scaffold_187_17
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15683..16168)
DNA (486bp) protein (162aa)
Phenylacetic acid degradation protein PaaI n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L8Q1_HALJP
Phenylacetic acid degradation protein PaaI {ECO:0000313|EMBL:KDS92247.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sacc
hypothetical protein
qs_8_scaffold_187_18
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16523..18937)
DNA (2415bp) protein (805aa)
Carbon-monoxide dehydrogenase (Acceptor) n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C2T5_9EURY
Carbon-monoxide dehydrogenase (Acceptor) {ECO:0000313|EMBL:ELZ16642.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
qs_8_scaffold_187_19
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19240..20352
DNA (1113bp) protein (371aa)
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXR0_9EURY
2-oxo acid dehydrogenase {ECO:0000313|EMBL:KDE57904.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
pyruvate dehydrogenase E1 component, alpha subunit
qs_8_scaffold_187_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20639..21772
DNA (1134bp) protein (378aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; EC=2.3.3.16 {ECO:0000256|PIRNR:PIRNR001369};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimpl
Citrate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKQ9_9EURY
citrate (si)-synthase
qs_8_scaffold_187_21
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22280..23050
DNA (771bp) protein (257aa)
ferredoxin id=24615974 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
DnaJ N-terminal domain-containing protein {ECO:0000313|EMBL:ESP88039.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source=
ferredoxin
qs_8_scaffold_187_22
unknown

Not on your lists

23151..23354
DNA (204bp) protein (68aa)

This feature has no annotations

qs_8_scaffold_187_23
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23365..24033
DNA (669bp) protein (223aa)
DNA-binding ferritin-like protein n=1 Tax=Halogranum salarium B-1 RepID=J3JI11_9EURY
DNA-binding ferritin-like protein {ECO:0000313|EMBL:EJN61469.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
dpsA; DNA-binding protein
qs_8_scaffold_187_24
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24192..24530
DNA (339bp) protein (113aa)
UvrABC system protein B n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VW67_9EURY
excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
qs_8_scaffold_187_25
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24566..25813
DNA (1248bp) protein (416aa)
Integrase family protein n=1 Tax=Halobacterium sp. DL1 RepID=G4ICY9_9EURY
Integrase {ECO:0000313|EMBL:AHG05030.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
integrase family protein
qs_8_scaffold_187_26
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25881..26525
DNA (645bp) protein (215aa)
DNA methylase N-4/N-6 domain-containing protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NDW4_9EURY
DNA methylase N-4/N-6 domain-containing protein {ECO:0000313|EMBL:EMA54880.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
hypothetical protein
qs_8_scaffold_187_27
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27100..29115
DNA (2016bp) protein (672aa)
DUF262/DUF1524/AAA-4 domain protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LNC0_HALWC
hypothetical protein
DUF262/DUF1524/AAA-4 domain protein {ECO:0000313|EMBL:CCC41926.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum wal
qs_8_scaffold_187_28
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29561..31486
DNA (1926bp) protein (642aa)
UvrABC system protein B n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CBA3_9EURY
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit B
qs_8_scaffold_187_29
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31658..32083
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IVQ8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESP87282.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
qs_8_scaffold_187_30
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

32080..32292
DNA (213bp) protein (71aa)
Transcriptional regulator n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GPH4_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ESP87281.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halo
putative transcriptional regulator
Displaying items 1-30 of 67 in total

View Taxonomy