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sw_6_scaffold_442

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_442_1
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..224
DNA (222bp) protein (74aa)
50S ribosomal protein L11 n=4 Tax=Haloarcula RepID=G0HVH1_HALHT
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica D
sw_6_scaffold_442_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


735..1373
DNA (639bp) protein (213aa)
50S ribosomal protein L1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CI89_9EURY
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000256|SAAS:SAAS00010815}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
rpl1P; 50S ribosomal protein L1
sw_6_scaffold_442_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


1375..1620
DNA (246bp) protein (82aa)
50S ribosomal protein L10 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWT8_HALMD
50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobact
sw_6_scaffold_442_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


1692..2303
DNA (612bp) protein (204aa)
50S ribosomal protein L10 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKE7_9EURY
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobact
rplP0; acidic ribosomal protein P0
sw_6_scaffold_442_5
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2313..2648
DNA (336bp) protein (112aa)
50S ribosomal protein L12 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PN44_9EURY
50S ribosomal protein L12a (P1/P2)
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea
sw_6_scaffold_442_6
unknown

Not on your lists

comp(2645..2869)
DNA (225bp) protein (75aa)

This feature has no annotations

sw_6_scaffold_442_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2866..3741)
DNA (876bp) protein (292aa)
Carotene biosynthesis associated membrane protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CX01_9EURY
Carotene biosynthesis associated membrane protein {ECO:0000313|EMBL:ELZ26962.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="H
carotene biosynthesis associated membrane protein
sw_6_scaffold_442_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3731..4612)
DNA (882bp) protein (294aa)
lye; lycopene elongase (EC:2.5.1.-)
Prenyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUQ1_9EURY
Prenyltransferase {ECO:0000313|EMBL:ELZ26961.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
sw_6_scaffold_442_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4615..4971)
DNA (357bp) protein (119aa)
Phytoene dehydrogenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUQ2_9EURY
Phytoene dehydrogenase {ECO:0000313|EMBL:ELZ26960.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
phytoene dehydrogenase
sw_6_scaffold_442_10
unknown

Not on your lists

5986..6177
DNA (192bp) protein (64aa)

This feature has no annotations

sw_6_scaffold_442_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6259..6933
DNA (675bp) protein (225aa)
Short chain dehydrogenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYJ8_9EURY
Short chain dehydrogenase {ECO:0000313|EMBL:ELZ26959.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
sdr1; short chain dehydrogenase
sw_6_scaffold_442_12
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7022..8872
DNA (1851bp) protein (617aa)
HTR-like protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G4A2_9EURY
HTR-like protein {ECO:0000313|EMBL:ELZ66392.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;"
signal transduction histidine kinase
sw_6_scaffold_442_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8900..10135
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK62_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22762.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
integral membrane protein superfamily
sw_6_scaffold_442_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10140..10550)
DNA (411bp) protein (137aa)
Cox cluster protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CD86_9EURY
Cox cluster protein {ECO:0000313|EMBL:ELZ20583.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
cox cluster protein
sw_6_scaffold_442_15
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10623..13298
DNA (2676bp) protein (892aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2DES2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERJ04597.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
hypothetical protein
sw_6_scaffold_442_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13364..13639)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CBD3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20586.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_442_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14495..15259
DNA (765bp) protein (255aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CE05_9EURY
sw_6_scaffold_442_18
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15400..15579
DNA (180bp) protein (60aa)
UPF0434 protein HalDL1DRAFT_1672 n=1 Tax=Halobacterium sp. DL1 RepID=G4ICF0_9EURY
UPF0434 protein HALDL1_10860 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp
hypothetical protein
sw_6_scaffold_442_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15782..16312
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CBD6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20591.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_442_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16376..17479)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CE09_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20592.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_442_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17476..18432)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CDA0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20598.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_442_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18503..20113
DNA (1611bp) protein (537aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=797114 species="Archaea; Eur
Cysteine--tRNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CBJ6_9EURY
cysteinyl-tRNA synthetase
sw_6_scaffold_442_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20182..21072
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CBE6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20601.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_442_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21069..21650
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CE01_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20582.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
corA; magnesium Mg(2+)/cobalt Co(2+) transport protein
sw_6_scaffold_442_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21912..23183
DNA (1272bp) protein (424aa)
Cytochrome c oxidase subunit I n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CBC9_9EURY
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:ELZ20581.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
cytochrome C oxidase subunit I
sw_6_scaffold_442_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23135..23761
DNA (627bp) protein (209aa)
coxA1; cytochrome c oxidase polypeptide I (EC:1.9.3.1)
Cytochrome c oxidase subunit I n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CBC9_9EURY
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:ELZ20581.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
sw_6_scaffold_442_27
unknown

Not on your lists

comp(23826..23969)
DNA (144bp) protein (48aa)

This feature has no annotations

sw_6_scaffold_442_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24002..24283
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CBI1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20580.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_442_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24349..26343)
DNA (1995bp) protein (665aa)
AMP-dependent synthetase and ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGK9_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ELZ21768.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
AMP-dependent synthetase and ligase
sw_6_scaffold_442_30
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26427..27017
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CET6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21770.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
ABC transporter
Displaying items 1-30 of 50 in total

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