ggKbase home page

qh_2_scaffold_486

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_486_1
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..1034
DNA (1032bp) protein (344aa)
Transposase ISH18 n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E169_9EURY
Transposase ISH18 {ECO:0000313|EMBL:ELZ40803.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 19288.;
transposase ISH18
qh_2_scaffold_486_2
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1465..3294)
DNA (1830bp) protein (610aa)
sdhA1; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JWY2_9EURY
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit {ECO:0000313|EMBL:EMA12469.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloar
qh_2_scaffold_486_3
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3631..3987
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CTC1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25119.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
qh_2_scaffold_486_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4049..5299)
DNA (1251bp) protein (417aa)
Thrombospondin type 3 repeat-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4A3_9EURY
Thrombospondin type 3 repeat-containing protein {ECO:0000313|EMBL:ELZ30356.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Hal
hypothetical protein
qh_2_scaffold_486_5
unknown

Not on your lists

comp(5712..5990)
DNA (279bp) protein (93aa)
hypothetical protein
qh_2_scaffold_486_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6303..6737)
DNA (435bp) protein (145aa)
succinate dehydrogenase and fumarate reductase iron-sulfur protein (EC:1.3.99.1)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein {ECO:0000313|EMBL:ACV48191.1}; EC=1.3.99.1 {ECO:0000313|EMBL:ACV48191.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NW62_HALMD
qh_2_scaffold_486_7
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6734..7129)
DNA (396bp) protein (132aa)
sdhB; succinate dehydrogenase subunit B (iron-sulfur protein) (EC:1.3.99.1)
Succinate dehydrogenase, subunit B (Iron-sulfur protein) n=2 Tax=Haloarcula hispanica RepID=G0HT92_HALHT
Succinate dehydrogenase {ECO:0000313|EMBL:AHB66075.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
qh_2_scaffold_486_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7133..7498)
DNA (366bp) protein (122aa)
Succinate dehydrogenase subunit D n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQQ5_9EURY
Succinate dehydrogenase subunit D {ECO:0000313|EMBL:ELZ24968.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carls
succinate dehydrogenase subunit D
qh_2_scaffold_486_9
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7498..7890)
DNA (393bp) protein (131aa)
Succinate dehydrogenase, cytochrome b556 subunit n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W4Q6_9EURY
succinate dehydrogenase, cytochrome b556 subunit
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:ELY60773.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Na
qh_2_scaffold_486_10
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8095..9735)
DNA (1641bp) protein (547aa)
ABC-type Fe3+-hydroxamate transport system, periplasmic component n=1 Tax=halophilic archaeon J07HX5 RepID=U1P5K7_9EURY
ABC-type Fe3+-hydroxamate transport system, periplasmic component {ECO:0000313|EMBL:ERG88817.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic arch
btuF; ABC-type vitamin B12 transporter, B12-binding component BtuF
qh_2_scaffold_486_11
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9795..10844
DNA (1050bp) protein (350aa)
ABC-type vitamin B12 transporter, permease component BtuC n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFG2_9EURY
btuC; ABC-type vitamin B12 transporter, permease component BtuC
ABC-type vitamin B12 transporter, permease component BtuC {ECO:0000313|EMBL:CCQ34377.1}; Cobalamin import system permease protein BtuC {ECO:0000313|EMBL:ERJ06063.1}; TaxID=1033806 species="Archaea; Eu
qh_2_scaffold_486_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10841..12022
DNA (1182bp) protein (394aa)
btuD; ABC-type vitamin B12 transporter, ATP-binding component BtuD id=24646167 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component {ECO:0000313|EMBL:ERH10346.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic
btuD; ABC-type vitamin B12 transporter, ATP-binding component BtuD
qh_2_scaffold_486_13
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12342..13466
DNA (1125bp) protein (375aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154, ECO:0000313|EMBL:ELY93684.1}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00
Protoheme IX farnesyltransferase n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0A541_9EURY
protoheme IX farnesyltransferase
qh_2_scaffold_486_14
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13575..14120)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B791_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ06685.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
hypothetical protein
qh_2_scaffold_486_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14458..14688
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0B4_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48906.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qh_2_scaffold_486_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14719..16473)
DNA (1755bp) protein (585aa)
DNA mismatch repair protein, MutS family n=1 Tax=halophilic archaeon J07HX64 RepID=U1QP04_9EURY
DNA mismatch repair protein, MutS family {ECO:0000313|EMBL:ERH08818.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
DNA mismatch repair protein
qh_2_scaffold_486_17
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16533..17036)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NNH2_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10200.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
qh_2_scaffold_486_18
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17065..20631)
DNA (3567bp) protein (1189aa)
hypothetical protein id=24646423 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10599.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_2_scaffold_486_19
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20628..21572)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NNH4_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10202.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
qh_2_scaffold_486_20
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21569..22054)
DNA (486bp) protein (162aa)
hypothetical protein id=24649512 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10602.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_2_scaffold_486_21
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22115..22579)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X5F5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY56696.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
qh_2_scaffold_486_22
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22745..23233
DNA (489bp) protein (163aa)
hypothetical protein id=24647647 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH08783.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_2_scaffold_486_23
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23293..26028)
DNA (2736bp) protein (912aa)
ATP dependent helicase, Lhr family n=1 Tax=halophilic archaeon J07HX64 RepID=U1PEA4_9EURY
ATP dependent helicase, Lhr family {ECO:0000313|EMBL:ERH08384.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
DEAD/DEAH box helicase
qh_2_scaffold_486_24
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26170..26628)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1MJL5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG89679.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
qh_2_scaffold_486_25
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26746..27474
DNA (729bp) protein (243aa)
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_01419}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_01419};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_01419};; EC=3.1.3.18 {ECO:0000256|HAMAP-Rule:MF_01
SPP-like hydrolase; K07024 id=24646405 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
haloacid dehalogenase
qh_2_scaffold_486_26
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27681..29300
DNA (1620bp) protein (540aa)
Protein synthesis factor GTP-binding n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NML8_HALUD
protein synthesis factor GTP-binding
Protein synthesis factor GTP-binding {ECO:0000313|EMBL:ACV11331.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus ut
qh_2_scaffold_486_27
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29388..30056)
DNA (669bp) protein (223aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 (EC:3.8.1.2)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N380_9EURY
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:EMA51988.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
qh_2_scaffold_486_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30159..31085
DNA (927bp) protein (309aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CTE2_9EURY
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ELZ25682.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsba
3-hydroxyacyl-CoA dehydrogenase
qh_2_scaffold_486_29
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31239..31418
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NT91_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10813.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
qh_2_scaffold_486_30

Not on your lists

31421..31687
DNA (267bp) protein (89aa)
ef1B; elongation factor 1-beta; K03232 elongation factor 1-beta id=24635684 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=141287
translation elongation factor aEF-1 beta
Displaying items 1-30 of 31 in total

View Taxonomy