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QH_2_Halobacteriales_65_14

In projects: QH_2  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Displaying items 1-50 of 113 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_2_scaffold_5763
Order: Halobacteriales (85.71%)
7 4377 bp 66.07 14.90 98.22
qh_2_scaffold_1158
Class: Halobacteria (66.67%)
3 7229 bp 66.22 13.99 97.57
qh_2_scaffold_1424
Class: Halobacteria (80%)
5 12861 bp 64.71 12.57 96.57
qh_2_scaffold_1645
Order: Halobacteriales (71.43%)
7 6398 bp 65.75 13.49 95.37
qh_2_scaffold_324
Class: Halobacteria (78.57%)
14 12263 bp 64.45 13.16 93.67
qh_2_scaffold_381
Order: Natrialbales (57.14%)
7 11351 bp 65.48 12.03 93.48
qh_2_scaffold_931
Order: Halobacteriales (57.14%)
28 22829 bp 65.22 12.78 93.47
qh_2_scaffold_5304
Class: Halobacteria (66.67%)
3 5150 bp 66.16 12.58 93.44
qh_2_scaffold_1314
Order: Halobacteriales (75%)
4 5884 bp 64.34 14.60 93.10
qh_2_scaffold_1293
Order: Halobacteriales (75%)
12 14462 bp 64.38 14.09 92.46
qh_2_scaffold_2892
Order: Halobacteriales (90%)
10 11061 bp 64.94 15.90 92.38
qh_2_scaffold_412
Order: Halobacteriales (64.29%)
14 13672 bp 65.13 13.31 91.83
qh_2_scaffold_456
Order: Halobacteriales (76.32%)
38 25116 bp 63.41 15.23 91.75
qh_2_scaffold_2818
Order: Halobacteriales (54.55%)
11 9427 bp 66.57 13.01 91.72
qh_2_scaffold_4509
Genus: Haloarcula (50%)
4 3027 bp 64.92 16.48 91.58
qh_2_scaffold_281
Order: Halobacteriales (85.71%)
21 19288 bp 63.46 12.56 91.33
qh_2_scaffold_1468
Order: Halobacteriales (83.33%)
6 8722 bp 64.93 12.86 91.32
qh_2_scaffold_1488
Order: Natrialbales (50%)
4 6511 bp 65.15 11.84 91.14
qh_2_scaffold_433
Class: Halobacteria (80%)
25 26736 bp 65.04 14.66 91.10
qh_2_scaffold_2632
Order: Halobacteriales (100%)
7 7749 bp 65.21 12.16 90.98
qh_2_scaffold_356
Order: Halobacteriales (53.85%)
13 11737 bp 64.41 13.94 90.38
qh_2_scaffold_975
Order: Halobacteriales (63.64%)
11 10668 bp 63.61 13.57 90.35
qh_2_scaffold_972
Order: Halobacteriales (51.22%)
41 34034 bp 66.36 13.48 90.27
qh_2_scaffold_1756
Class: Halobacteria (80%)
10 12365 bp 64.87 14.99 90.16
qh_2_scaffold_1880
Class: Halobacteria (71.43%)
7 8338 bp 65.02 12.58 90.02
qh_2_scaffold_437
Order: Natrialbales (60%)
10 10583 bp 63.91 14.06 89.66
qh_2_scaffold_365
Order: Halobacteriales (76.92%)
26 22313 bp 64.15 12.36 89.64
qh_2_scaffold_508
Order: Halobacteriales (100%)
8 9760 bp 65.54 13.60 89.57
qh_2_scaffold_720
Order: Halobacteriales (52.17%)
23 25605 bp 66.20 14.18 89.48
qh_2_scaffold_529
Class: Halobacteria (80.77%)
26 27389 bp 64.28 11.90 89.47
qh_2_scaffold_855
Class: Halobacteria (66.67%)
21 16180 bp 62.92 14.69 89.33
qh_2_scaffold_286
Order: Halobacteriales (67.65%)
34 29182 bp 63.09 12.03 89.03
qh_2_scaffold_1979
Order: Halobacteriales (50%)
4 4763 bp 61.70 11.74 88.87
qh_2_scaffold_575
Class: Halobacteria (91.3%)
23 26122 bp 66.28 15.37 88.52
qh_2_scaffold_2612
Order: Halobacteriales (50%)
8 6247 bp 66.77 13.19 88.51
qh_2_scaffold_396
Order: Halobacteriales (70.37%)
27 26563 bp 64.27 12.35 88.42
qh_2_scaffold_2731
Order: Halobacteriales (75%)
8 6397 bp 65.42 14.30 87.95
qh_2_scaffold_794
Order: Halobacteriales (60%)
20 18774 bp 65.11 13.32 87.90
qh_2_scaffold_1014
Order: Halobacteriales (50%)
28 23361 bp 65.77 13.11 87.83
qh_2_scaffold_1090
Order: Halobacteriales (80%)
15 14598 bp 65.19 15.15 87.77
qh_2_scaffold_3803
Class: Halobacteria (66.67%)
9 9307 bp 64.38 14.42 87.71
qh_2_scaffold_901
Order: Halobacteriales (59.09%)
22 19519 bp 63.45 13.18 87.68
qh_2_scaffold_486
Order: Halobacteriales (74.19%)
31 32808 bp 64.49 13.47 87.65
qh_2_scaffold_479
Order: Halobacteriales (72.34%)
47 40845 bp 65.30 14.73 87.44
qh_2_scaffold_162
Order: Halobacteriales (63.93%)
61 66418 bp 64.41 14.85 87.24
qh_2_scaffold_2134
Order: Halobacteriales (80%)
5 4550 bp 64.57 15.91 87.23
qh_2_scaffold_701
Class: Halobacteria (78.38%)
37 39889 bp 66.21 15.69 87.20
qh_2_scaffold_571
Order: Halobacteriales (70%)
10 9726 bp 62.80 12.01 87.17
qh_2_scaffold_3907
Class: Halobacteria (77.78%)
9 8702 bp 64.43 16.01 86.81
qh_2_scaffold_239
Class: Halobacteria (76.47%)
17 15696 bp 63.23 13.36 86.68
Displaying items 1-50 of 113 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.