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qh_7_scaffold_1251

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_1251_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..647)
DNA (645bp) protein (215aa)
DNA-binding protein MutS2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBB6_9EURY
DNA-binding protein MutS2 {ECO:0000256|HAMAP-Rule:MF_00971}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
mutS2; mismatch repair protein
qh_7_scaffold_1251_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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779..1684
DNA (906bp) protein (302aa)
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEN0_9EURY
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase {ECO:0000313|EMBL:EMA55145.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
qh_7_scaffold_1251_3
unknown

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2186..2314
DNA (129bp) protein (43aa)

This feature has no annotations

qh_7_scaffold_1251_4
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2308..2628
DNA (321bp) protein (107aa)
response regulator receiver protein id=24642575 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
HoxA-like transcriptional regulator {ECO:0000313|EMBL:ERH12517.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
qh_7_scaffold_1251_5
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2702..3445)
DNA (744bp) protein (248aa)
circadian clock protein, KaiC (EC:2.7.11.1)
Circadian clock protein, KaiC n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E4Y1_9EURY
Circadian clock protein, KaiC {ECO:0000313|EMBL:ELZ42841.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum
qh_7_scaffold_1251_6

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4027..5523
DNA (1497bp) protein (499aa)
PAS sensor histidine kinase n=1 Tax=uncultured archaeon A07HR67 RepID=V4X731_9ARCH
PAS sensor histidine kinase {ECO:0000313|EMBL:ESS03494.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
histidine kinase
qh_7_scaffold_1251_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5686..6303)
DNA (618bp) protein (206aa)
cobC; probable adenosylcobalamin 5'-phosphate phosphatase / alpha-ribazole 5'-phosphate phosphatase (EC:3.1.3.73)
Fructose-2,6-bisphosphatase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDH9_9EURY
Fructose-2,6-bisphosphatase {ECO:0000313|EMBL:EMA55144.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
qh_7_scaffold_1251_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6438..6596
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD89_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43737.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
small CPxCG-related zinc finger protein
qh_7_scaffold_1251_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6593..7354)
DNA (762bp) protein (254aa)
Phosphoglucosamine mutase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB00_9EURY
Phosphoglucosamine mutase {ECO:0000313|EMBL:EMA55142.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
qh_7_scaffold_1251_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7960..9354)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEI5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43748.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_7_scaffold_1251_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9478..10875
DNA (1398bp) protein (466aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBA8_9EURY
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I {ECO:0000313|EMBL:EMA55136.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcu
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
qh_7_scaffold_1251_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10916..11599
DNA (684bp) protein (228aa)
Carbonic anhydrase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH36_9EURY
Carbonic anhydrase {ECO:0000313|EMBL:EMA43750.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5
IcfA
qh_7_scaffold_1251_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11768..12502
DNA (735bp) protein (245aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDG5_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA55129.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
Bacterio-opsin activator HTH domain-containing protein
qh_7_scaffold_1251_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12546..12923)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDA3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43752.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
qh_7_scaffold_1251_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13487..14353)
DNA (867bp) protein (289aa)
Alpha/beta fold family hydrolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEJ0_9EURY
Alpha/beta fold family hydrolase {ECO:0000313|EMBL:EMA43753.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacchar
alpha/beta hydrolase fold protein
qh_7_scaffold_1251_16
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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15036..15920
DNA (885bp) protein (295aa)
Branched chain amino acid ABC transporter branched chain amino acid-binding protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JX91_9EURY
Branched chain amino acid ABC transporter branched chain amino acid-binding protein {ECO:0000313|EMBL:EMA13792.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
branched chain amino acid ABC transporter branched chain amino acid-binding protein
qh_7_scaffold_1251_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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15924..16724
DNA (801bp) protein (267aa)
ABC transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQU1_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ24259.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
amino acid/amide ABC transporter ATP-binding protein 1, haat family
qh_7_scaffold_1251_18
unknown

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16721..16849
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 18 items

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