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qh_7_scaffold_229

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_229_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..646)
DNA (645bp) protein (215aa)
IclR-like transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAC7_9EURY
IclR-like transcriptional regulator {ECO:0000313|EMBL:EMA42701.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
hypothetical protein
qh_7_scaffold_229_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1179..1835)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC02_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55093.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qh_7_scaffold_229_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2664..4442)
DNA (1779bp) protein (593aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1227456 species="Archaea
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2)
NAD-dependent DNA ligase LigA n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAV6_9EURY
qh_7_scaffold_229_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4587..4838)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N676_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52195.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qh_7_scaffold_229_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5002..6819)
DNA (1818bp) protein (606aa)
Probable translation initiation factor IF-2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2U9_9EURY
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
translation initiation factor eaIF-5B
qh_7_scaffold_229_6
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6893..7942)
DNA (1050bp) protein (350aa)
Brp-like protein-like protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JQW2_HALVA
Brp-like protein-like protein {ECO:0000313|EMBL:EMA11381.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismorti
blh; Brp-like protein-like
qh_7_scaffold_229_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7933..8724)
DNA (792bp) protein (264aa)
lycopene cyclase n=1 Tax=Halomicrobium katesii RepID=UPI00037F68E7
lycopene cyclase domain-containing protein
Lycopene cyclase domain protein {ECO:0000313|EMBL:ACV47405.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
qh_7_scaffold_229_8
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8896..9693)
DNA (798bp) protein (266aa)
Cruxrhodopsin n=2 Tax=Haloarcula japonica RepID=Q9YGB7_HALJP
Cruxrhodopsin {ECO:0000313|EMBL:BAA81816.1}; Flags: Precursor;; TaxID=29282 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica.
rhodopsin
qh_7_scaffold_229_9
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9873..11582)
DNA (1710bp) protein (570aa)
Bacterio-opsin activator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3G3_HALJB
bacterio-opsin activator
Bacterio-opsin activator {ECO:0000313|EMBL:ADJ15270.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotga
qh_7_scaffold_229_10
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(11814..12308)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CN55_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23309.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
qh_7_scaffold_229_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12567..12863
DNA (297bp) protein (99aa)
PRC-barrel domain-containing protein n=2 Tax=Halococcus RepID=M0MEP5_9EURY
PRC-barrel domain-containing protein {ECO:0000313|EMBL:EMA52197.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sal
PRC-barrel domain-containing protein
qh_7_scaffold_229_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12863..13321
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCQ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43133.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
DNA-binding protein
qh_7_scaffold_229_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13344..14108)
DNA (765bp) protein (255aa)
CAAX amino terminal protease family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N500_9EURY
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EMA52199.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
CAAX amino terminal protease family protein
qh_7_scaffold_229_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14191..15477)
DNA (1287bp) protein (429aa)
Probable glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473};; Phosphoglucose isomerase {ECO:000
phosphoglucose isomerase (PGI) (EC:5.3.1.9)
Probable glucose-6-phosphate isomerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBK9_9EURY
qh_7_scaffold_229_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15553..16149
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFD3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43130.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_7_scaffold_229_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16146..16733
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEP0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43129.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_7_scaffold_229_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16874..18508
DNA (1635bp) protein (545aa)
AAA ATPase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M7U0_9EURY
AAA ATPase {ECO:0000313|EMBL:EMA40684.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
alpha-1,6-glucosidase
qh_7_scaffold_229_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18593..19450
DNA (858bp) protein (286aa)
Protein-export membrane protein SecF n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N685_9EURY
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
preprotein translocase subunit SecF
qh_7_scaffold_229_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19447..20715
DNA (1269bp) protein (423aa)
Protein-export membrane protein SecD n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2V7_9EURY
Protein-export membrane protein SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
secD; preprotein translocase subunit SecD
Displaying 19 items

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