ggKbase home page

qh_7_scaffold_90

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_90_1
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..770
DNA (768bp) protein (256aa)
Phosphoribosyltransferase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AXR2_9EURY
Phosphoribosyltransferase {ECO:0000313|EMBL:ELZ02768.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
phosphoribosyltransferase
qh_7_scaffold_90_2
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(629..1927)
DNA (1299bp) protein (433aa)
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SVX4_NATMM
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:ADD03693.1}; Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:ELY34457.1}; T
qh_7_scaffold_90_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2092..3549
DNA (1458bp) protein (486aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8Q8_9EURY
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:EMA54266.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
qh_7_scaffold_90_4

Not on your lists

comp(3797..4546)
DNA (750bp) protein (250aa)
Trehalose utilization protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4YAP8_9ARCH
Trehalose utilization protein {ECO:0000313|EMBL:ESS08177.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
PalA
qh_7_scaffold_90_5
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4817..5197)
DNA (381bp) protein (127aa)
Translation initiation inhibitor n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0I0T6_9EURY
Translation initiation inhibitor {ECO:0000313|EMBL:ELZ89562.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC
dfrA
qh_7_scaffold_90_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5420..6712
DNA (1293bp) protein (431aa)
Major facilitator superfamily protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQG2_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:EMA46979.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
major facilitator superfamily protein
qh_7_scaffold_90_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6759..8021)
DNA (1263bp) protein (421aa)
Major facilitator superfamily transporter quinolone resistance protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MSE4_9EURY
Major facilitator superfamily transporter quinolone resistance protein {ECO:0000313|EMBL:EMA47390.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Ha
major facilitator superfamily protein
qh_7_scaffold_90_8
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8283..8846)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KHB4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA19534.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
qh_7_scaffold_90_9
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9166..10290
DNA (1125bp) protein (375aa)
Metallo-beta-lactamase domain protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WL10_METH6
Metallo-beta-lactamase domain protein
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:AET63564.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methan
qh_7_scaffold_90_10
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10382..11227)
DNA (846bp) protein (282aa)
aldo/keto reductase n=1 Tax=Halococcus hamelinensis RepID=UPI00029AA9CC
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ADJ15114.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (s
qh_7_scaffold_90_11
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11377..14184)
DNA (2808bp) protein (936aa)
DEAD/H associated domain protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NR67_HALUD
DEAD/H associated domain protein {ECO:0000313|EMBL:ACV12980.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahen
ATP-dependent helicase
qh_7_scaffold_90_12
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14361..15029
DNA (669bp) protein (223aa)
Type 11 methyltransferase n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0A7N8_9EURY
Type 11 methyltransferase {ECO:0000313|EMBL:ELY94790.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.
methyltransferase type 11
qh_7_scaffold_90_13
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15212..15577
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IE15_HALRX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB16207.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193 /
qh_7_scaffold_90_14
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15837..16241
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IC14_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG04094.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
qh_7_scaffold_90_15
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16167..18434)
DNA (2268bp) protein (756aa)
Arabinose efflux permease n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CW58_9EURY
Arabinose efflux permease {ECO:0000313|EMBL:ELZ26104.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
major facilitator superfamily transporter
qh_7_scaffold_90_16
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(18580..20535)
DNA (1956bp) protein (652aa)
ABC transporter related protein id=2877055 bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC transporter; K02006 cobalt/nickel transport system ATP-binding protein Tax=GWC2_RIF_CHLX_73_18_curated
ABC transporter-like protein
qh_7_scaffold_90_17
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20532..21308)
DNA (777bp) protein (259aa)
Cobalt transport protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUT4_RUBXD
cobalt transport protein
Cobalt transport protein {ECO:0000313|EMBL:ABG04844.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubro
qh_7_scaffold_90_18

Not on your lists

comp(21305..22000)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XUY9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS02367.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
signal transduction histidine kinase LytS
qh_7_scaffold_90_19
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(22217..23587)
DNA (1371bp) protein (457aa)
ADP-ribosylglycohydrolase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZ91_9BACT
ADP-ribosylglycohydrolase Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
ADP-ribosylglycohydrolase
qh_7_scaffold_90_20
unknown

Not on your lists

24034..24156
DNA (123bp) protein (41aa)

This feature has no annotations

qh_7_scaffold_90_21
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(24120..24980)
DNA (861bp) protein (287aa)
Protein pelota homolog {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00004956}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00011872};; TaxID=1132509 species="Archaea; E
Protein pelota homolog n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LTW4_9EURY
translation release factor pelota
qh_7_scaffold_90_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25296..26183)
DNA (888bp) protein (296aa)
Branched-chain amino acid aminotransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9F6_9EURY
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EMA53744.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
class IV aminotransferase
qh_7_scaffold_90_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26313..27260)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZ92_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA37679.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qh_7_scaffold_90_24
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27285..28211)
DNA (927bp) protein (309aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=931277 species="Archaea; Euryar
Shikimate dehydrogenase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIW5_HALMO
shikimate 5-dehydrogenase
qh_7_scaffold_90_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28396..29787
DNA (1392bp) protein (464aa)
Sodium/calcium exchanger membrane subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHW2_9EURY
Sodium/calcium exchanger membrane subunit {ECO:0000313|EMBL:EMA44928.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
sodium/calcium exchanger membrane subunit
qh_7_scaffold_90_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29935..31317
DNA (1383bp) protein (461aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1227455 species="Archa
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGR9_9EURY
hypothetical protein
qh_7_scaffold_90_27
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31413..32558
DNA (1146bp) protein (382aa)
Cell division protein FtsZ n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KPE0_9EURY
cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.
qh_7_scaffold_90_28
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

32865..33038
DNA (174bp) protein (58aa)
sec61c; preprotein translocase Sec61 subunit gamma; K07342 protein transport protein SEC61 subunit gamma and related proteins id=24620965 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1238427 species="Archaea; Euryarchaeo
secE; preprotein translocase subunit SecE
qh_7_scaffold_90_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


33040..33477
DNA (438bp) protein (146aa)
Transcription elongation factor Spt5 n=2 Tax=Halococcus RepID=M0MJL6_9EURY
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
NusG antitermination factor
qh_7_scaffold_90_30
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

34057..35253
DNA (1197bp) protein (399aa)
Erythromycin esterase-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N934_9EURY
Erythromycin esterase-like protein {ECO:0000313|EMBL:EMA53160.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salif
eye; succinoglycan biosynthesis
Displaying items 1-30 of 47 in total

View Taxonomy