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qh_7_scaffold_1711

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_1711_1
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3..656)
DNA (654bp) protein (218aa)
Signal recognition particle receptor FtsY n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAH5_9EURY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Halofer
ftsY; signal recognition particle receptor SRalpha
qh_7_scaffold_1711_2
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(672..1163)
DNA (492bp) protein (164aa)
prefoldin, subunit alpha; K04797 prefoldin alpha subunit id=24616519 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
pfdA; prefoldin subunit alpha
qh_7_scaffold_1711_3
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1160..1351)
DNA (192bp) protein (64aa)
50S ribosomal protein L18Ae n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=RL18A_HALUD
rplX; 50S ribosomal protein LX
50S ribosomal protein L18Ae {ECO:0000255|HAMAP-Rule:MF_00273}; 50S ribosomal protein L20e {ECO:0000255|HAMAP-Rule:MF_00273}; 50S ribosomal protein LX {ECO:0000255|HAMAP-Rule:MF_00273}; TaxID=519442 sp
qh_7_scaffold_1711_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1620..2120)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JH50_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60681.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qh_7_scaffold_1711_5

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comp(2117..2671)
DNA (555bp) protein (185aa)
Transcription initiation factor IIB n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DJW7_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archa
transcription initiation factor iib (tfiib)
qh_7_scaffold_1711_6
unknown

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comp(2782..3048)
DNA (267bp) protein (89aa)

This feature has no annotations

qh_7_scaffold_1711_7

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comp(3073..3558)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2ML94_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN05571.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_7_scaffold_1711_8
unknown

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comp(3643..3762)
DNA (120bp) protein (40aa)

This feature has no annotations

qh_7_scaffold_1711_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4033..4311
DNA (279bp) protein (93aa)
Transcriptional regulator, ArsR family n=1 Tax=halophilic archaeon J07HX64 RepID=U1PD95_9EURY
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ERH08321.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
putative transcriptional regulator
qh_7_scaffold_1711_10
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4308..4649
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB54_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR53468.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
qh_7_scaffold_1711_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4656..5321)
DNA (666bp) protein (222aa)
Translation initiation factor 6 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QN11_9EURY
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
translation initiation factor eIF-6
qh_7_scaffold_1711_12
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(5323..5601)
DNA (279bp) protein (93aa)
50S ribosomal protein L31e n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I9S2_HALRX
ribosomal protein L31E
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM
qh_7_scaffold_1711_13
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5601..5753)
DNA (153bp) protein (51aa)
50S ribosomal protein L39e n=2 Tax=Halobacteriaceae RepID=F8DBV1_HALXS
50S ribosomal protein L39
50S ribosomal protein L39e {ECO:0000256|HAMAP-Rule:MF_00629, ECO:0000313|EMBL:EMA34008.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" sourc
qh_7_scaffold_1711_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5998..6759)
DNA (762bp) protein (254aa)
Metal transporter family GufA protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBI1_9EURY
Metal transporter family GufA protein {ECO:0000313|EMBL:EMA55332.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
zinc/iron permease
qh_7_scaffold_1711_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6854..7411)
DNA (558bp) protein (186aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1227457 species="A
2'-5' RNA ligase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8F0_9EURY
2'-5' RNA ligase
qh_7_scaffold_1711_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7466..8332
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDP0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42799.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
TPR repeat-containing protein
qh_7_scaffold_1711_17
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8338..8754
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CLP9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22809.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
qh_7_scaffold_1711_18
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8804..8935
DNA (132bp) protein (44aa)
Uncharacterized protein {ECO:0000313|EMBL:EFW90230.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
qh_7_scaffold_1711_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8932..11061)
DNA (2130bp) protein (710aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKU8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46296.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_7_scaffold_1711_20
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11172..11924)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XK13_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY62109.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
qh_7_scaffold_1711_21
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12038..12208
DNA (171bp) protein (57aa)
Uncharacterized protein n=2 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=M0J3G0_HALMT
Uncharacterized protein {ECO:0000313|EMBL:ELZ95193.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
hypothetical protein
qh_7_scaffold_1711_22
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12376..12606
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M8C5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKH98556.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
hypothetical protein
Displaying 22 items

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