ggKbase home page

qh_9_scaffold_245_5

Organism: QH_9_Halococcus_66_26

near complete RP 30 / 55 MC: 6 BSCG 26 / 51 MC: 1 ASCG 37 / 38 MC: 1
Location: comp(4020..4871)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDM8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 283.0
  • Bit_score: 517
  • Evalue 6.70e-144
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 283.0
  • Bit_score: 517
  • Evalue 9.40e-144
tfb1; transcription initiation factor IIB similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 278.0
  • Bit_score: 384
  • Evalue 2.50e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 852
ATGGAATCAAACGGGGTGTGCTCGGAATGTAACGGTCGATTGGTCGCCGTTGACGGGGAGACGGCCTGTAGCGACTGTGGTCTCGTCGTCGCGGCCGACGAGATCGACCGCGGTCCCGAGTGGCGGTCGTTCGAGCGCGAGACGCGCGAGCGGACCGGCGCGCCGCTGACGCGCTCGCGCCACGATCGCGGCCTCTCGACCGAGATCGGCCGGTCGACACGGCTCACCGGGCGGAAACGCCGGCTGTTCGCGCGACTCCGCCGCCAGCACACCCGCTCGCGGATCGCCTCGAAGGCCGAGCGCAACCGAGTGTACGCCTTCACCGAGATCCGACGGCAAGTCTGTGCGCTCGGACTGTCCGACAGCGTCCGGGATCGCGCCTGCGTGCTGTTCGAGTCGGCCCAGGACGCGGACCTCCTTCGGGGGCGCTCGCTCGAAGGCTTCGCGGCCGCGACCCTCTATGCGGTCTGTCGAACCAACGGTGTCTCGCGCACGCTCGCGGAGATCGTCACGGTCGCAAAGGCCTCGCGTGACGAACTCACGGCTGCGTACGACGCCCTGAACCGCGAACTCGGGCTGCCGACCGGCCCGATCGACCCCACGGAGTATCTCGCGCGGTTCGCATCGCAGTTGGACCTCCCACACGAGATCGAGGCGCGAGCCCGGGAACTCGTCGCCGAGGGCCGTGATCGCGGCGTGATCGGCGGCCGGAATCCGAGCGGGGTGGCCGCGGCCTGTCTCTACACCGCGGCGACCGAACGCGGCCACGCGCTCACCCAAGAGGCGGCCGCCGAAGTCGCGGACGTGACGCCGGTGACGCTCCGGGCGACCTATCAGGAGCTACGCGCCTGA
PROTEIN sequence
Length: 284
MESNGVCSECNGRLVAVDGETACSDCGLVVAADEIDRGPEWRSFERETRERTGAPLTRSRHDRGLSTEIGRSTRLTGRKRRLFARLRRQHTRSRIASKAERNRVYAFTEIRRQVCALGLSDSVRDRACVLFESAQDADLLRGRSLEGFAAATLYAVCRTNGVSRTLAEIVTVAKASRDELTAAYDALNRELGLPTGPIDPTEYLARFASQLDLPHEIEARARELVAEGRDRGVIGGRNPSGVAAACLYTAATERGHALTQEAAAEVADVTPVTLRATYQELRA*