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qh_9_scaffold_245

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_245_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..902
DNA (900bp) protein (300aa)
DEAD/DEAH box helicase domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBH5_9EURY
DEAD/DEAH box helicase domain-containing protein {ECO:0000313|EMBL:EMA54918.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
DEAD/DEAH box helicase domain-containing protein
qh_9_scaffold_245_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(905..1180)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCV3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54919.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_9_scaffold_245_3
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1375..1791
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MGX8_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA43954.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
Protein of unknown function (DUF3257)
qh_9_scaffold_245_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1895..3991
DNA (2097bp) protein (699aa)
MCM family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEV1_9EURY
MCM family protein {ECO:0000313|EMBL:EMA43868.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5
MCM family protein
qh_9_scaffold_245_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4020..4871)
DNA (852bp) protein (284aa)
Transcription initiation factor IIB n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDM8_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
tfb1; transcription initiation factor IIB
qh_9_scaffold_245_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4942..5367)
DNA (426bp) protein (142aa)
Histidine triad protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDP2_9EURY
Histidine triad protein {ECO:0000313|EMBL:EMA43866.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hit2; histidine triad protein
qh_9_scaffold_245_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5422..6054)
DNA (633bp) protein (211aa)
Uracil-DNA glycosylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCV8_9EURY
Uracil-DNA glycosylase {ECO:0000313|EMBL:EMA54924.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
Uracil-DNA glycosylase superfamily
qh_9_scaffold_245_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6197..9382
DNA (3186bp) protein (1062aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1227456 species="Archaea; E
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NE17_9EURY
qh_9_scaffold_245_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9389..10240)
DNA (852bp) protein (284aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAM5_9EURY
ribose-phosphate pyrophosphokinase
qh_9_scaffold_245_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10262..11101)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDN5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43856.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_9_scaffold_245_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11525..12436)
DNA (912bp) protein (304aa)
arginase (EC:3.5.3.1)
Arginase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPW2_9EURY
Arginase {ECO:0000313|EMBL:EMA46774.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
qh_9_scaffold_245_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12501..13418)
DNA (918bp) protein (306aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN14_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EMA46773.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
nucleoside-diphosphate-sugar epimerase
qh_9_scaffold_245_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13545..14069
DNA (525bp) protein (175aa)
Transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM48_9EURY
Transcriptional regulator {ECO:0000313|EMBL:EMA46772.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu
hypothetical protein
qh_9_scaffold_245_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14100..14699)
DNA (600bp) protein (200aa)
Transcription regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM69_9EURY
Transcription regulator {ECO:0000313|EMBL:EMA46771.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
transcriptional regulator
qh_9_scaffold_245_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14795..15250)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQL0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46770.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
membrane protease subunit, stomatin/prohibitin
qh_9_scaffold_245_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16066..16680)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPV8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46769.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_9_scaffold_245_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16826..17065)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEY8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55659.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qh_9_scaffold_245_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(17107..19173)
DNA (2067bp) protein (689aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1227456 species="Archaea;
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDM9_9EURY
qh_9_scaffold_245_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19520..20119)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQK5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46765.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_9_scaffold_245_20
unknown

Not on your lists

comp(20157..20276)
DNA (120bp) protein (40aa)

This feature has no annotations

qh_9_scaffold_245_21
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20387..21031)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IR72_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ97964.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
hypothetical protein
qh_9_scaffold_245_22
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21276..23537)
DNA (2262bp) protein (754aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PI
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTJ0_9EURY
qh_9_scaffold_245_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23651..24553)
DNA (903bp) protein (301aa)
Phenazine biosynthesis protein PhzF family n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDN5_9EURY
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:EMA55668.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
phenazine biosynthesis protein PhzF family
qh_9_scaffold_245_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24692..25822
DNA (1131bp) protein (377aa)
Purine phosphoribosyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN00_9EURY
Purine phosphoribosyltransferase {ECO:0000313|EMBL:EMA46758.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacchar
putative phosphoribosyltransferase
qh_9_scaffold_245_25
unknown

Not on your lists

25900..26223
DNA (324bp) protein (108aa)

This feature has no annotations

qh_9_scaffold_245_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26326..27177
DNA (852bp) protein (284aa)
Purine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01963};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01963};; TaxID=1227456 species="Archaea; Euryarch
Purine nucleoside phosphorylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCU1_9EURY
methylthioadenosine phosphorylase
qh_9_scaffold_245_27
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27819..29357)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBW9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54584.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_9_scaffold_245_28
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29575..30720
DNA (1146bp) protein (382aa)
Putative sulfatase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VXD8_9EURY
putative sulfatase
Putative sulfatase {ECO:0000313|EMBL:AGN00926.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
qh_9_scaffold_245_29
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30872..31927)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NAJ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54583.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
lysylphosphatidylglycerol synthetase family membrane protein (UPF0104)
qh_9_scaffold_245_30
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31908..32804)
DNA (897bp) protein (299aa)
polysaccharide deacetylase (EC:3.5.1.-)
Polysaccharide deacetylase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N9G3_9EURY
Polysaccharide deacetylase {ECO:0000313|EMBL:EMA54582.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis
Displaying items 1-30 of 36 in total

View Taxonomy