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qs_1_scaffold_1880

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1880_1
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..175
DNA (174bp) protein (58aa)
pheA2; prephenate dehydratase (EC:4.2.1.51); K04518 prephenate dehydratase [EC:4.2.1.51] id=24655527 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase {ECO:0000313|EMBL:ERG88979.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
qs_1_scaffold_1880_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(226..1947)
DNA (1722bp) protein (574aa)
Signal transduction histidine kinase n=1 Tax=halophilic archaeon J07HX64 RepID=U1NX60_9EURY
Signal transduction histidine kinase {ECO:0000313|EMBL:ERH08715.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
histidine kinase
qs_1_scaffold_1880_3
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2193..3290
DNA (1098bp) protein (366aa)
cctA2; thermosome subunit alpha id=24646343 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
cctA2; thermosome subunit alpha
Thermosome alpha subunit {ECO:0000313|EMBL:AAV47636.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (str
qs_1_scaffold_1880_4
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3837..4037)
DNA (201bp) protein (67aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5V178_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV46725.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qs_1_scaffold_1880_5
uncultivated_archaeon_J07ABHX6, HalobacterialesCP, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4206..4670)
DNA (465bp) protein (155aa)
hypothetical protein id=24645143 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
hypothetical protein id=24648229 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
qs_1_scaffold_1880_6
unknown

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comp(4780..5097)
DNA (318bp) protein (106aa)

This feature has no annotations

qs_1_scaffold_1880_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5165..5677
DNA (513bp) protein (171aa)
Ribonuclease BN n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNW9_9EURY
ribonuclease BN
Ribonuclease BN {ECO:0000313|EMBL:CCQ33637.1}; Ribonuclease BN protein {ECO:0000313|EMBL:ERJ05368.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Ha
qs_1_scaffold_1880_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5785..7140)
DNA (1356bp) protein (452aa)
L-glutamine synthetase (EC:6.3.1.2) id=24646431 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic ar
glutamine synthetase, type I
qs_1_scaffold_1880_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7265..7720
DNA (456bp) protein (152aa)
Transcriptional regulator, AsnC family n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZT1_HALMD
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACV46839.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrob
qs_1_scaffold_1880_10
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7807..8535
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K4H0_9EURY
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Uncharacterized protein {ECO:0000313|EMBL:AGB39911.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
qs_1_scaffold_1880_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8588..11500)
DNA (2913bp) protein (971aa)
Excinuclease ABC, A subunit n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NX90_HALMD
excinuclease ABC subunit A
Excinuclease ABC, A subunit {ECO:0000313|EMBL:ACV46455.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohat
qs_1_scaffold_1880_12
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11905..12357
DNA (453bp) protein (151aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=G0HYP4_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM58945.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
qs_1_scaffold_1880_13
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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12377..13297
DNA (921bp) protein (307aa)
Alpha/beta hydrolase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CTD8_9EURY
Alpha/beta hydrolase {ECO:0000313|EMBL:ELZ26495.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM
hypothetical protein
qs_1_scaffold_1880_14
unknown

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comp(13219..13413)
DNA (195bp) protein (65aa)

This feature has no annotations

qs_1_scaffold_1880_15

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13490..14602
DNA (1113bp) protein (371aa)
Malate/L-lactate dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZWJ3_9ARCH
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:ESS07320.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
malate/L-lactate dehydrogenase
qs_1_scaffold_1880_16
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14925..16172
DNA (1248bp) protein (416aa)
amidohydrolase, imidazolonepropionase id=24616300 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Amidohydrolase, imidazolonepropionase {ECO:0000313|EMBL:ESP87798.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Can
amidohydrolase, imidazolonepropionase
qs_1_scaffold_1880_17
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16191..16685)
DNA (495bp) protein (165aa)
N-acetyltransferase GCN5 n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LDY8_9EURY
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EMA31801.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
acetyltransferase (GNAT) family protein
qs_1_scaffold_1880_18
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(16708..17280)
DNA (573bp) protein (191aa)
Orc1/cdc6 family replication initiation protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NSG9_HALUD
orc1/cdc6 family replication initiation protein
Orc1/cdc6 family replication initiation protein {ECO:0000313|EMBL:ACV12056.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Hal
qs_1_scaffold_1880_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17363..18502)
DNA (1140bp) protein (380aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; EC=2.3.3.16 {ECO:0000256|PIRNR:PIRNR001369};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimpl
Citrate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKQ9_9EURY
citrate (si)-synthase
qs_1_scaffold_1880_20
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19585..20019)
DNA (435bp) protein (145aa)
act; acyl-CoA thioester hydrolase (EC:3.1.2.-)
Acyl-CoA hydrolase n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NH95_9EURY
Acyl-CoA hydrolase {ECO:0000313|EMBL:ERG96248.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW2.;"
qs_1_scaffold_1880_21
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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20282..21985
DNA (1704bp) protein (568aa)
AMP-dependent synthetase and ligase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CBT1_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ELZ20746.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limi
AMP-dependent synthetase and ligase
qs_1_scaffold_1880_22
unknown

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comp(22113..22337)
DNA (225bp) protein (75aa)

This feature has no annotations

qs_1_scaffold_1880_23
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(22409..23272)
DNA (864bp) protein (288aa)
Pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit n=2 Tax=Haloarcula hispanica RepID=G0HQI5_HALHT
2-oxoacid ferredoxin oxidoreductase
2-oxoacid ferredoxin oxidoreductase {ECO:0000313|EMBL:AJF26913.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp.
Displaying 23 items

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