ggKbase home page

qs_1_scaffold_2614

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_2614_1
unknown

Not on your lists

comp(159..281)
DNA (123bp) protein (41aa)

This feature has no annotations

qs_1_scaffold_2614_2
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(405..842)
DNA (438bp) protein (146aa)
Transcription elongation factor Spt5 n=1 Tax=halophilic archaeon J07HX5 RepID=U1N040_9EURY
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
NusG antitermination factor
qs_1_scaffold_2614_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(858..1031)
DNA (174bp) protein (58aa)
secE; protein translocase subunit SecE id=24644251 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1085028 species="Archaea; Euryarchaeo
secE; preprotein translocase subunit SecE
qs_1_scaffold_2614_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1198..2262)
DNA (1065bp) protein (355aa)
Cell division protein FtsZ n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CW20_9EURY
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.
cell division protein FtsZ
qs_1_scaffold_2614_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2684..4075)
DNA (1392bp) protein (464aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1085028 species="Archa
hypothetical protein; K09716 hypothetical protein id=24647851 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
hypothetical protein
qs_1_scaffold_2614_6
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4167..6302)
DNA (2136bp) protein (712aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DAJ7_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH35802.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
qs_1_scaffold_2614_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6474..7097
DNA (624bp) protein (208aa)
hypothetical protein id=24647897 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH09026.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_1_scaffold_2614_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7219..7785
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3W6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28854.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_1_scaffold_2614_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7856..8215
DNA (360bp) protein (120aa)
hypothetical protein id=24644809 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH09024.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_1_scaffold_2614_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8212..9078
DNA (867bp) protein (289aa)
hypothetical protein id=24644808 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH09023.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_1_scaffold_2614_11
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9104..9838
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LLU0_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA34522.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qs_1_scaffold_2614_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9835..10518
DNA (684bp) protein (228aa)
cobyrinic acid ac-diamide synthase; K03609 septum site-determining protein MinD id=24646446 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:ERH10622.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
cobyrinic acid ac-diamide synthase
qs_1_scaffold_2614_13
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10699..11124
DNA (426bp) protein (142aa)
Transcriptional regulator, HxlR family n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NR66_HALUD
transcriptional regulator, HxlR family
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ACV12979.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus
qs_1_scaffold_2614_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11125..12078)
DNA (954bp) protein (318aa)
ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
Ribonuclease Z n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1I6_HALMD
qs_1_scaffold_2614_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12166..12834
DNA (669bp) protein (223aa)
TRK potassium uptake system protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CU74_9EURY
TRK potassium uptake system protein {ECO:0000313|EMBL:ELZ26800.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
potassium transporter Trk
qs_1_scaffold_2614_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12831..13406)
DNA (576bp) protein (192aa)
Response regulator receiver protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3V6_HALMD
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACV47778.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
qs_1_scaffold_2614_17
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13603..14685
DNA (1083bp) protein (361aa)
Circadian regulator n=2 Tax=Haloarcula hispanica RepID=G0HUT7_HALHT
kaiC1; circadian regulator
Circadian regulator {ECO:0000313|EMBL:AEM56244.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain ATC
qs_1_scaffold_2614_18

Not on your lists

comp(14842..15282)
DNA (441bp) protein (147aa)
Putative membrane-bound metal-dependent hydrolase (DUF457) n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y5H0_9ARCH
Putative membrane-bound metal-dependent hydrolase (DUF457) {ECO:0000313|EMBL:ESS10083.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
membrane protein
qs_1_scaffold_2614_19
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15548..16153
DNA (606bp) protein (202aa)
Sortase related acyltransferase n=1 Tax=Halonotius sp. J07HN6 RepID=U1NH32_9EURY
Sortase related acyltransferase {ECO:0000313|EMBL:ERH02755.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;
GCN5-like N-acetyltransferase
qs_1_scaffold_2614_20
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16223..16918
DNA (696bp) protein (232aa)
Phosphatidylserine synthase n=1 Tax=Halonotius sp. J07HN6 RepID=U1NYZ6_9EURY
Phosphatidylserine synthase {ECO:0000313|EMBL:ERH02754.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
phosphatidylserine synthase
qs_1_scaffold_2614_21
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16918..17631
DNA (714bp) protein (238aa)
Putative metal-dependent phosphoesterases (PHP family) n=1 Tax=Halonotius sp. J07HN6 RepID=U1Q870_9EURY
Putative metal-dependent phosphoesterases (PHP family) {ECO:0000313|EMBL:ERH02753.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="
hypothetical protein
qs_1_scaffold_2614_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17780..18910)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D293_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28817.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_1_scaffold_2614_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18897..19268)
DNA (372bp) protein (124aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021};; TaxID=797114 species="Archaea; Eur
hisI2; bifunctional phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZY9_9EURY
qs_1_scaffold_2614_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19610..20551)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1B3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29306.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_1_scaffold_2614_25
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20661..21626
DNA (966bp) protein (322aa)
Putative aminoglycoside phosphotransferase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IDV4_HALRX
putative aminoglycoside phosphotransferase
Putative aminoglycoside phosphotransferase {ECO:0000313|EMBL:AGB17735.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber
qs_1_scaffold_2614_26
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21953..22846)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PLQ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH11069.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_1_scaffold_2614_27
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22980..23399
DNA (420bp) protein (140aa)
RDD domain-containing protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HSI7_9EURY
RDD domain-containing protein {ECO:0000313|EMBL:ELZ86733.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BA
RDD domain-containing protein
qs_1_scaffold_2614_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23706..25226
DNA (1521bp) protein (507aa)
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=797114 species="Archaea; Euryar
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase II small subunit n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3B5_9EURY
Displaying 28 items

View Taxonomy